RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 FHOD1Q9Y613 1164 aa18.34■□□□□ 0.53
CADM1-220ENST00000546000 RNF225M0QZC1 329 aaPredicted RBP18.33■□□□□ 0.52
CADM1-220ENST00000546000 PMM2O15305 246 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 EFCAB14O75071 495 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 DGKIO75912 1065 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 CDC25BP30305 580 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 PBX3P40426 434 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 CLCNKBP51801 687 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 NOP14P78316 857 aaKnown RBP18.33■□□□□ 0.52
CADM1-220ENST00000546000 TRPC3Q13507 836 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 ZNF699Q32M78 642 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 IQCEQ6IPM2 695 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 PHLDB3Q6NSJ2 640 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 NT5DC4Q86YG4 428 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 HASPINQ8TF76 798 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 ARID3AQ99856 593 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 RC3H2Q9HBD1 1191 aaKnown RBP18.33■□□□□ 0.52
CADM1-220ENST00000546000 NUB1Q9Y5A7 615 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 SCN1AP35498 2009 aa18.33■□□□□ 0.52
CADM1-220ENST00000546000 ITIH6Q6UXX5 1313 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 ANO9A1A5B4 782 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 H0YGN5 161 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 PODXLO00592 558 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 SPTLC1O15269 473 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 GYPCP04921 128 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 PNMA6AP0CW24 399 aaPredicted RBP18.32■□□□□ 0.52
CADM1-220ENST00000546000 DSC1Q08554 894 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 TUSC3Q13454 348 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 KLHDC7AQ5VTJ3 777 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 RRAGAQ7L523 313 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 DRC7Q8IY82 874 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 NEK11Q8NG66 645 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 CPLX3Q8WVH0 158 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 TTYH3Q9C0H2 523 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 NRDE2Q9H7Z3 1164 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 SLC38A7Q9NVC3 462 aa18.32■□□□□ 0.52
CADM1-220ENST00000546000 HOXA2O43364 376 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 XPOTO43592 962 aaKnown RBP18.31■□□□□ 0.52
CADM1-220ENST00000546000 ASS1P00966 412 aaKnown RBP18.31■□□□□ 0.52
CADM1-220ENST00000546000 ITGB1P05556 798 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 CYP3A5P20815 502 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 LRPAP1P30533 357 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 RAP1GAPP47736 663 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
CADM1-220ENST00000546000 POLR2FP61218 127 aaKnown RBP18.31■□□□□ 0.52
CADM1-220ENST00000546000 RBP5P82980 135 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 RNASELQ05823 741 aaKnown RBP18.31■□□□□ 0.52
CADM1-220ENST00000546000 CETN1Q12798 172 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 ARID5BQ14865 1188 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 SHHQ15465 462 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 FAM109BQ6ICB4 259 aaPredicted RBP18.31■□□□□ 0.52
CADM1-220ENST00000546000 COLGALT2Q8IYK4 626 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 KREMEN1Q96MU8 473 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 NT5C1BQ96P26 610 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 SDCBP2Q9H190 292 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 NLRC4Q9NPP4 1024 aa18.31■□□□□ 0.52
CADM1-220ENST00000546000 PRG3Q9Y2Y8 225 aaPredicted RBP18.31■□□□□ 0.52
CADM1-220ENST00000546000 I3L4J1 428 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 PIRO00625 290 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 ZC3H11AO75152 810 aaKnown RBP eCLIP18.3■□□□□ 0.52
CADM1-220ENST00000546000 KIF4AO95239 1232 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 TRIM21P19474 475 aaKnown RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 SLC11A1P49279 550 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 TBX2Q13207 712 aaPredicted RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 CD300LGQ6UXG3 332 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 FAM43BQ6ZT52 329 aaPredicted RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 PPM1KQ8N3J5 372 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 ZNF689Q96CS4 500 aaPredicted RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 PLCB1Q9NQ66 1216 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 NXF1Q9UBU9 619 aaKnown RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 APEX2Q9UBZ4 518 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 MRPL42Q9Y6G3 142 aaKnown RBP18.3■□□□□ 0.52
CADM1-220ENST00000546000 SLC4A7Q9Y6M7 1214 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 KIAA1671Q9BY89 1806 aa18.3■□□□□ 0.52
CADM1-220ENST00000546000 GRXCR1A8MXD5 290 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 UCHL3P15374 230 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 ASPAP45381 313 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 OR1G1P47890 313 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 BCAR1P56945 870 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 RAPGEF1Q13905 1077 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 UPP1Q16831 310 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 RASIP1Q5U651 963 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 E4F1Q66K89 784 aaPredicted RBP18.29■□□□□ 0.52
CADM1-220ENST00000546000 TMEM173Q86WV6 379 aaPredicted RBP18.29■□□□□ 0.52
CADM1-220ENST00000546000 HERC6Q8IVU3 1022 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 BCL7CQ8WUZ0 217 aaPredicted RBP18.29■□□□□ 0.52
CADM1-220ENST00000546000 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
CADM1-220ENST00000546000 TSPAN18Q96SJ8 248 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 YME1L1Q96TA2 773 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 NIF3L1Q9GZT8 377 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 CWH43Q9H720 699 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 UBE2TQ9NPD8 197 aaPredicted RBP18.29■□□□□ 0.52
CADM1-220ENST00000546000 MARCH5Q9NX47 278 aa18.29■□□□□ 0.52
CADM1-220ENST00000546000 DNAJC12Q9UKB3 198 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms