RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 ERMARDQ5T6L9 678 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 TWF2Q6IBS0 349 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ARHGEF18Q6ZSZ5 1173 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 MARK2Q7KZI7 788 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PHLDB2Q86SQ0 1253 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 GPIHBP1Q8IV16 184 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 LILRB2Q8N423 598 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 MTMR14Q8NCE2 650 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 DAGLBQ8NCG7 672 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 GMCL1P1Q8NEA9 526 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ANKRD36BP1Q96IX9 119 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 SPATA17Q96L03 361 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 CCDC43Q96MW1 224 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 CEP44Q9C0F1 390 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 KLHL4Q9C0H6 718 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 VPS33BQ9H267 617 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ELP3Q9H9T3 547 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 DDX43Q9NXZ2 648 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 SEPT10Q9P0V9 454 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 DMGDHQ9UI17 866 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 TMCC3Q9ULS5 477 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PCDHA12Q9UN75 941 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 RPL26L1Q9UNX3 145 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 CTNND2Q9UQB3 1225 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 USH1CQ9Y6N9 552 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 SMIM31A0A1B0GVY4 71 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 RASA4BC9J798 803 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FAM86B1E9PN63 330 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PDE2AO00408 941 aaPredicted RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 RASA4O43374 803 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 KCNJ13O60928 360 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 EIF2S1P05198 315 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FAM86B2P0C5J1 330 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PIM1P11309 404 aaPredicted RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ETS2P15036 469 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 EIF2AK2P19525 551 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 RGS2P41220 211 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PPP2R2AP63151 447 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 MDM2Q00987 491 aaPredicted RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 NR1D2Q14995 579 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ZC2HC1CQ53FD0 456 aaPredicted RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FAM133BQ5BKY9 247 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 TMTC4Q5T4D3 741 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 KCNK18Q7Z418 384 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 VPS36Q86VN1 386 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FAM133AQ8N9E0 248 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ZNF579Q8NAF0 562 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PPFIBP2Q8ND30 876 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 OTUD5Q96G74 571 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 MED30Q96HR3 178 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 VPS50Q96JG6 964 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FAM129AQ9BZQ8 928 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 DISC1Q9NRI5 854 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FAM114A2Q9NRY5 505 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 EMILIN3Q9NT22 766 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 PGAP2Q9UHJ9 254 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 ZNHIT2Q9UHR6 403 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 HBS1LQ9Y450 684 aaKnown RBP7.09□□□□□ -1.27
NECAP1-208ENST00000545807 TLL2Q9Y6L7 1015 aa7.09□□□□□ -1.27
NECAP1-208ENST00000545807 FOCADQ5VW36 1801 aa7.09□□□□□ -1.28
NECAP1-208ENST00000545807 TRIM49BA6NDI0 452 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 E9PMD0 336 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 CDK2AP1O14519 115 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 OAS1P00973 400 aaKnown RBP7.08□□□□□ -1.28
NECAP1-208ENST00000545807 PRKACBP22694 351 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 LONP1P36776 959 aaKnown RBP7.08□□□□□ -1.28
NECAP1-208ENST00000545807 TMED10P49755 219 aaKnown RBP7.08□□□□□ -1.28
NECAP1-208ENST00000545807 LRRC41Q15345 812 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 TMEM266Q2M3C6 531 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 AGBL2Q5U5Z8 902 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 FKBP1CQ5VVH2 108 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 MAP1SQ66K74 1059 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-208ENST00000545807 SNRNP48Q6IEG0 339 aaKnown RBP7.08□□□□□ -1.28
NECAP1-208ENST00000545807 TRIM67Q6ZTA4 783 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 CCDC51Q96ER9 411 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 ERP44Q9BS26 406 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 IFT122Q9HBG6 1241 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 CRNNQ9UBG3 495 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-208ENST00000545807 TUBE1Q9UJT0 475 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 SATB2Q9UPW6 733 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 ABCB11O95342 1321 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 FER1L6Q2WGJ9 1857 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 NPHP3-ACAD11A0A0J9YXS1 232 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 POTEB3A0JP26 581 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 ANKRD34BA5PLL1 514 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 POTECB2RU33 542 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 LYNP07948 512 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 SERPINB6P35237 376 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 VHLP40337 213 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 RXRGP48443 463 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 DPYDQ12882 1025 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 ZBTB17Q13105 803 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 ECM1Q16610 540 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 MUM1Q2TAK8 710 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 NAALADL2Q58DX5 795 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 KRT79Q5XKE5 535 aa7.08□□□□□ -1.28
NECAP1-208ENST00000545807 DCAF15Q66K64 600 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms