RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PRRG1O14668 218 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 RAP1GAPP47736 663 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 SCRN1Q12765 414 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 LRRC32Q14392 662 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 CALCRLQ16602 461 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.19■□□□□ 0.18
RTN3-214ENST00000545432 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 SYNPOQ8N3V7 929 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 BEST2Q8NFU1 509 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 ZSCAN18Q8TBC5 510 aaPredicted RBP16.19■□□□□ 0.18
RTN3-214ENST00000545432 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 NACC1Q96RE7 527 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
RTN3-214ENST00000545432 PTPRHQ9HD43 1115 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 C2orf42Q9NWW7 574 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 GDAQ9Y2T3 454 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 SDK1Q7Z5N4 2213 aa16.19■□□□□ 0.18
RTN3-214ENST00000545432 HEPACAM2A8MVW5 462 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 CDKL5O76039 1030 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 KCNE1P15382 129 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 GRM5P41594 1212 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 EFNA5P52803 228 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 NR5A1Q13285 461 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 CCINQ13939 588 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 PLA2G2CQ5R387 149 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 IQCEQ6IPM2 695 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 MAEAQ7L5Y9 396 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 RALGPS2Q86X27 583 aaPredicted RBP16.18■□□□□ 0.18
RTN3-214ENST00000545432 SUSD3Q96L08 255 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 ZNF512Q96ME7 567 aaPredicted RBP16.18■□□□□ 0.18
RTN3-214ENST00000545432 RBM12Q9NTZ6 932 aaKnown RBP16.18■□□□□ 0.18
RTN3-214ENST00000545432 CEP295Q9C0D2 2601 aa16.18■□□□□ 0.18
RTN3-214ENST00000545432 WNT7AO00755 349 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 PROS1P07225 676 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 WEE1P30291 646 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 RPL9P32969 192 aaKnown RBP16.17■□□□□ 0.18
RTN3-214ENST00000545432 IL31Q6EBC2 164 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 TXNDC11Q6PKC3 985 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 Q6ZS52 159 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 TMC8Q8IU68 726 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 SHKBP1Q8TBC3 707 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 CCDC43Q96MW1 224 aaKnown RBP16.17■□□□□ 0.18
RTN3-214ENST00000545432 ZMAT2Q96NC0 199 aaKnown RBP16.17■□□□□ 0.18
RTN3-214ENST00000545432 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
RTN3-214ENST00000545432 LSM14BQ9BX40 385 aaKnown RBP16.17■□□□□ 0.18
RTN3-214ENST00000545432 SLC38A7Q9NVC3 462 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 RALGAPA1Q6GYQ0 2036 aa16.17■□□□□ 0.18
RTN3-214ENST00000545432 PODXLO00592 558 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 PFKFB2O60825 505 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 MED24O75448 989 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 REC8O95072 547 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 EPN2O95208 641 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 VNN2O95498 520 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 FDPSP14324 419 aaKnown RBP16.16■□□□□ 0.18
RTN3-214ENST00000545432 MUTP22033 750 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 TXKP42681 527 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 IRX6P78412 446 aaPredicted RBP16.16■□□□□ 0.18
RTN3-214ENST00000545432 STK3Q13188 491 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 PPP2R5AQ15172 486 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 ATF7IP2Q5U623 682 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 ELMOD1Q8N336 334 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 DEPTORQ8TB45 409 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 LRRC3BQ96PB8 259 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 ASAH2Q9NR71 780 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 RXFP3Q9NSD7 469 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 OBP2AQ9NY56 170 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 CNTN3Q9P232 1028 aa16.16■□□□□ 0.18
RTN3-214ENST00000545432 TICRRQ7Z2Z1 1910 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 SPECC1L-ADORA2AF8WAN1 911 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 ABLIM1O14639 778 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
RTN3-214ENST00000545432 OAZ2O95190 189 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 RPA1P27694 616 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 HOXC13P31276 330 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 CTHP32929 405 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 TWF1Q12792 350 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 SF3A2Q15428 464 aaKnown RBP16.15■□□□□ 0.18
RTN3-214ENST00000545432 TEAD2Q15562 447 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 CTXN3Q4LDR2 81 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 PADI6Q6TGC4 694 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 CENPQQ7L2Z9 268 aaPredicted RBP16.15■□□□□ 0.18
RTN3-214ENST00000545432 APBB1IPQ7Z5R6 666 aaPredicted RBP16.15■□□□□ 0.18
RTN3-214ENST00000545432 CEP120Q8N960 986 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 ZC3H10Q96K80 434 aaKnown RBP16.15■□□□□ 0.18
RTN3-214ENST00000545432 CDT1Q9H211 546 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 TOPORSQ9NS56 1045 aaPredicted RBP16.15■□□□□ 0.18
RTN3-214ENST00000545432 WASF3Q9UPY6 502 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 PCDHGA5Q9Y5G8 931 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 TRIP11Q15643 1979 aa16.15■□□□□ 0.18
RTN3-214ENST00000545432 GREB1Q4ZG55 1949 aa16.14■□□□□ 0.17
RTN3-214ENST00000545432 NEMFO60524 1076 aa16.14■□□□□ 0.17
RTN3-214ENST00000545432 AKAP3O75969 853 aa16.14■□□□□ 0.17
RTN3-214ENST00000545432 KCNK5O95279 499 aa16.14■□□□□ 0.17
RTN3-214ENST00000545432 GJA1P17302 382 aa16.14■□□□□ 0.17
RTN3-214ENST00000545432 PROZP22891 400 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms