RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ECHDC2Q86YB7 292 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 WFDC8Q8IUA0 241 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 C12orf50Q8NA57 414 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 STK35Q8TDR2 534 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 HDAC7Q8WUI4 952 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 SMG7Q92540 1137 aaKnown RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 CUL5Q93034 780 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 CLDN23Q96B33 292 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 MTMR8Q96EF0 704 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 IGSF21Q96ID5 467 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 MYADMQ96S97 322 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 PLEKHA4Q9H4M7 779 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 PIDD1Q9HB75 910 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 CAPN10Q9HC96 672 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 OSGEPQ9NPF4 335 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 MAN1C1Q9NR34 630 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 MRPL17Q9NRX2 175 aaKnown RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 ZDHHC7Q9NXF8 308 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 DACT1Q9NYF0 836 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 DDX19BQ9UMR2 479 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 CYP8B1Q9UNU6 501 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 TLR6Q9Y2C9 796 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 SAMM50Q9Y512 469 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 EPG5Q9HCE0 2579 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 PLXNA4Q9HCM2 1894 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 COL1A2P08123 1366 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 BAHCC1Q9P281 2608 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 KIAA1671Q9BY89 1806 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 RIF1Q5UIP0 2472 aaKnown RBP4.63□□□□□ -1.67
SNHG1-220ENST00000544550 A0A0U1RQF3 1178 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 EIF4E1BA6NMX2 242 aaKnown RBP4.63□□□□□ -1.67
SNHG1-220ENST00000544550 SRRM3A6NNA2 597 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-220ENST00000544550 NT5C1B-RDH14C9J2C7 533 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 LINC01387J3KSC0 135 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 FOXP2O15409 715 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 HBP1O60381 514 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 EIF4EBP3O60516 100 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-220ENST00000544550 GREM1O60565 184 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 LRRN2O75325 713 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 KCNK5O95279 499 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 PAPLNO95428 1278 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 GLUD1P00367 558 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 FGAP02671 866 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 PF4P02776 101 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 URODP06132 367 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 KCNA2P16389 499 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 KLRC1P26715 233 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 ARNTP27540 789 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 DGKGP49619 791 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 STAT5BP51692 787 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 GPC5P78333 572 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 ADCY1Q08828 1119 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF252P-AS1Q0IIN9 211 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 CAMK2GQ13555 558 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-220ENST00000544550 MTMR1Q13613 665 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 LPAL2Q16609 132 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 CLLU1OSQ5K130 101 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 TSSK4Q6SA08 328 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 PDZD3Q86UT5 571 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 FAM228AQ86W67 206 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 TICAM2Q86XR7 235 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 SULF2Q8IWU5 870 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 RNF169Q8NCN4 708 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 SMARCC2Q8TAQ2 1214 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 TMEM40Q8WWA1 233 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 SREK1Q8WXA9 508 aaKnown RBP4.63□□□□□ -1.67
SNHG1-220ENST00000544550 AUTS2Q8WXX7 1259 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 SPON2Q9BUD6 331 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 NRSN2Q9GZP1 204 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 HELLSQ9NRZ9 838 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 RXFP3Q9NSD7 469 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 SLC9A2Q9UBY0 812 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 INPP5FQ9Y2H2 1132 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 TRIOO75962 3097 aa4.63□□□□□ -1.67
SNHG1-220ENST00000544550 KIAA1217Q5T5P2 1943 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 KLRF2D3W0D1 207 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 MAN2B1O00754 1011 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SMARCA5O60264 1052 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 PPP1R11O60927 126 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ATP9AO75110 1047 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 GPR32O75388 356 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SOD2P04179 222 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 GALTP07902 379 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 CNPP09543 421 aaKnown RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TDGF1P13385 188 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 AMPD1P23109 780 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TMOD1P28289 359 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 CDC25BP30305 580 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ARL4DP49703 201 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 RNASELQ05823 741 aaKnown RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 C19orf57Q0VDD7 668 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 MTAPQ13126 283 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 AP3B2Q13367 1082 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 GNL2Q13823 731 aaKnown RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 WTAPQ15007 396 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SETDB1Q15047 1291 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 LRRC14Q15048 493 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 KIZQ2M2Z5 673 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF484Q5JVG2 852 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 VPS53Q5VIR6 699 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms