RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 EIF2AQ9BY44 585 aaKnown RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 IMPG2Q9BZV3 1241 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 PDE11AQ9HCR9 933 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 PLCB1Q9NQ66 1216 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 RGS18Q9NS28 235 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 INTS13Q9NVM9 706 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 GCNT4Q9P109 453 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 GIT1Q9Y2X7 761 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 COQ4Q9Y3A0 265 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 IPPQ9Y573 584 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 PCDHB2Q9Y5E7 798 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 BRWD1Q9NSI6 2320 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 VPS13AQ96RL7 3174 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 ABHD14A-ACY1A0A1B0GW23 586 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 A0A1W2PQJ5 194 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 LACTBL1A8MY62 500 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 GFRA3O60609 400 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 RECQL4O94761 1208 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 CXCL10P02778 98 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 CXCL8P10145 99 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 IRS1P35568 1242 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 TNFSF9P41273 254 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 GCLMP48507 274 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 OSTNP61366 133 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 DEFB103AP81534 67 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 BIRC3Q13489 604 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 COL19A1Q14993 1142 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 TSR1Q2NL82 804 aaKnown RBP10.26□□□□□ -0.77
YBX3-215ENST00000544504 ZACNQ401N2 412 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 CNKSR3Q6P9H4 555 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 SV2AQ7L0J3 742 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 CNGA4Q8IV77 575 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 CEP120Q8N960 986 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 ZSWIM2Q8NEG5 633 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 BEST2Q8NFU1 509 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 FAM212AQ96EL1 285 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 FAXDC2Q96IV6 333 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 RPS6KC1Q96S38 1066 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 MMRN2Q9H8L6 949 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 SLC38A7Q9NVC3 462 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 PARP2Q9UGN5 583 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 FBXL5Q9UKA1 691 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 SIK3Q9Y2K2 1263 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 ZNF318Q5VUA4 2279 aa10.26□□□□□ -0.77
YBX3-215ENST00000544504 ZFHX2Q9C0A1 2572 aaPredicted RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 TANC1Q9C0D5 1861 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 TULP1O00294 542 aaPredicted RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 HOXA2O43364 376 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 KCNE1P15382 129 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 PAX3P23760 479 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 PIK3CAP42336 1068 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 DLG4P78352 724 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 TFAMQ00059 246 aaKnown RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 PPP3CAQ08209 521 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 TRPC3Q13507 836 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 MBTPS1Q14703 1052 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 SLC10A6Q3KNW5 377 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 SEZ6Q53EL9 994 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 XKR4Q5GH76 650 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 ZBTB41Q5SVQ8 909 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 C1orf220Q5T0J3 134 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 IER5LQ5T953 404 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 EHBP1Q8NDI1 1231 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 PLEKHO2Q8TD55 490 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 TAF4BQ92750 862 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 EDAQ92838 391 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 LSM14BQ9BX40 385 aaKnown RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 TMX1Q9H3N1 280 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 NXF3Q9H4D5 531 aaKnown RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 RAB20Q9NX57 234 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 SNTG2Q9NY99 539 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 CEP72Q9P209 647 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 CNTN3Q9P232 1028 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 MUTYHQ9UIF7 546 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 ITGA11Q9UKX5 1188 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 UBQLN1Q9UMX0 589 aaKnown RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 LUC7L2Q9Y383 392 aaKnown RBP10.25□□□□□ -0.77
YBX3-215ENST00000544504 INSL6Q9Y581 213 aa10.25□□□□□ -0.77
YBX3-215ENST00000544504 RALGAPA2Q2PPJ7 1873 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 C9IYK1 514 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 AKR1B15C9JRZ8 316 aaPredicted RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 NCK2O43639 380 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 NBNO60934 754 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 C4BPAP04003 597 aaKnown RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 P4HA1P13674 534 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CYP3A5P20815 502 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 PON1P27169 355 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 ATICP31939 592 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 FAM189BP81408 668 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 ZBED6P86452 979 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 TCF15Q12870 199 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms