RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 ACACAQ13085 2346 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 NOTCH4Q99466 2003 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SPAG17Q6Q759 2223 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 F8W810 466 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 DDX39AO00148 427 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 MAN2B1O00754 1011 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 KALRNO60229 2985 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 ECI2O75521 394 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 PAPSS2O95340 614 aaPredicted RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 POMCP01189 267 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 HSP90AA1P07900 732 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 RPL17P18621 184 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 TMOD1P28289 359 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SMARCA1P28370 1054 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 HOXC13P31276 330 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 KIF5BP33176 963 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 NOVA1P51513 510 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 PDE1AP54750 535 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SRSF11Q05519 484 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 DRP2Q13474 957 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 ECM1Q16610 540 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 IMMTQ16891 758 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 C4orf46Q504U0 113 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 MIS18BP1Q6P0N0 1132 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 Q6ZVU0 165 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 MRPL10Q7Z7H8 261 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 LONP2Q86WA8 852 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 FMNL3Q8IVF7 1028 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 COLGALT2Q8IYK4 626 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 GPR65Q8IYL9 337 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 VWA5B2Q8N398 1253 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 C12orf50Q8NA57 414 aaPredicted RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 DNASE1L2Q92874 299 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 RRP36Q96EU6 259 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 B3GALT6Q96L58 329 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SRPK1Q96SB4 655 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SCNM1Q9BWG6 230 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 LMAN1LQ9HAT1 526 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 LY9Q9HBG7 655 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 PGPEP1Q9NXJ5 209 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SIRPGQ9P1W8 387 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 KANSL3Q9P2N6 904 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 NDRG2Q9UN36 371 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 CEP131Q9UPN4 1083 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 PIN4Q9Y237 131 aaKnown RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 PRG3Q9Y2Y8 225 aaPredicted RBP5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 PCDHB2Q9Y5E7 798 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 APC2O95996 2303 aa5.43□□□□□ -1.54
NPIPB4-219ENST00000543660 SPTA1P02549 2419 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 A0A087WZ62 844 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 CDC14CA4D256 554 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 FIGNL2A6NMB9 653 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 CCER2I3L3R5 266 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 M0R2N6 131 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 IFIT3O14879 490 aaKnown RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 ZNF862O60290 1169 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 EPN2O95208 641 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 CAPNS1P04632 268 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 PDGFRBP09619 1106 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 HNRNPA1P09651 372 aaKnown RBP eCLIP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 CHRNB1P11230 501 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 SDSP20132 328 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 HOXA6P31267 233 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 HOXA9P31269 272 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 RAP1GAPP47736 663 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 OR1G1P47890 313 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 RAB27AP51159 221 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 DSC1Q08554 894 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 ZNF252P-AS1Q0IIN9 211 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 HDAC1Q13547 482 aaPredicted RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 PLA2G4EQ3MJ16 856 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 OXLD1Q5BKU9 147 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 TANGO2Q6ICL3 276 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 CEP68Q76N32 757 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 SPEM1Q8N4L4 309 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 URGCPQ8TCY9 931 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 FAM3CQ92520 227 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 PGBD4Q96DM1 585 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 LOXL4Q96JB6 756 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 PGBD1Q96JS3 809 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 MAP3K14Q99558 947 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 FDXACB1Q9BRP7 624 aaPredicted RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 DSCC1Q9BVC3 393 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 GCOM2Q9BZD3 368 aaPredicted RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 GPR62Q9BZJ7 368 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 SMOC1Q9H4F8 434 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 RSAD1Q9HA92 442 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 HCFC1R1Q9NWW0 138 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 C2orf42Q9NWW7 574 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 SEC63Q9UGP8 760 aaKnown RBP5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 FBXW11Q9UKB1 542 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 KCNH3Q9ULD8 1083 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 COMMD10Q9Y6G5 202 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 PCNX2A6NKB5 2137 aa5.42□□□□□ -1.54
NPIPB4-219ENST00000543660 CFAP46Q8IYW2 2715 aa5.41□□□□□ -1.54
NPIPB4-219ENST00000543660 TENM4Q6N022 2769 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms