RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
TNC-212ENST00000542877 ZNF235Q14590 738 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 TTC23LQ6PF05 361 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 CATSPER3Q86XQ3 398 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 CLMNQ96JQ2 1002 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.21
TNC-212ENST00000542877 GFAPP14136 432 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 ITGA8P53708 1063 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 NCOA4Q13772 614 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 SERPINB12Q96P63 405 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 CARD9Q9H257 536 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 DFFAO00273 331 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 MOCS2O96007 188 aaPredicted RBP13.77□□□□□ -0.21
TNC-212ENST00000542877 STAT5BP51692 787 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 TMEM154Q6P9G4 183 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 SETD3Q86TU7 594 aaPredicted RBP13.77□□□□□ -0.21
TNC-212ENST00000542877 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.21
TNC-212ENST00000542877 ZNF555Q8NEP9 628 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 MCEEQ96PE7 176 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
TNC-212ENST00000542877 IRAK4Q9NWZ3 460 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 NSMCE4AQ9NXX6 385 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 PCDHGB4Q9UN71 923 aa13.77□□□□□ -0.21
TNC-212ENST00000542877 SMAD1Q15797 465 aaKnown RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 C4orf22Q6V702 233 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 TMCO5AQ8N6Q1 288 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 AFG1LQ8WV93 481 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 EME1Q96AY2 570 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 THTPAQ9BU02 230 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 NYAP2Q9P242 653 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 B2RBV5 119 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 ZNF197O14709 1029 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 WEE2P0C1S8 567 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 ATICP31939 592 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 SPRP35270 261 aaPredicted RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 SULT1E1P49888 294 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 RBP5P82980 135 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 C3orf62Q6ZUJ4 267 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 ASIC4Q96FT7 647 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 TMEM8AQ9HCN3 771 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 CASS4Q9NQ75 786 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 NDFIP2Q9NV92 336 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 ENO3P13929 434 aaPredicted RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 HSD17B3P37058 310 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 FNTAP49354 379 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 DDX42Q86XP3 938 aaKnown RBP eCLIP13.76□□□□□ -0.21
TNC-212ENST00000542877 PCYOX1LQ8NBM8 494 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 NSL1Q96IY1 281 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 PCMTD2Q9NV79 361 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 DDX5P17844 614 aaKnown RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 MAP4P27816 1152 aaKnown RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 SLC29A2Q14542 456 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 FRMD8Q9BZ67 464 aaPredicted RBP13.76□□□□□ -0.21
TNC-212ENST00000542877 MANSC1Q9H8J5 431 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 PLAGL2Q9UPG8 496 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 ZNF711Q9Y462 761 aa13.76□□□□□ -0.21
TNC-212ENST00000542877 TULP4Q9NRJ4 1543 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 FLT1P17948 1338 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 SEC24DO94855 1032 aaPredicted RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 KLK7P49862 253 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 PATL1Q86TB9 770 aaKnown RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 ARHGEF1Q92888 912 aaKnown RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 SPON2Q9BUD6 331 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 CHMP2BQ9UQN3 213 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 IGF2BP3O00425 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNC-212ENST00000542877 CSF1RP07333 972 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 PTK2BQ14289 1009 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 APOBEC3FQ8IUX4 373 aaKnown RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 RMDN1Q96DB5 314 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 MED15Q96RN5 788 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 DNAJC7Q99615 494 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 ADAM33Q9BZ11 813 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 ADNPQ9H2P0 1102 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 MARCOQ9UEW3 520 aaPredicted RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 SUFUQ9UMX1 484 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 OVOS2A0A0G2JMS6 1433 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 OVOS2A0A0J9YW53 1432 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 OVOS2Q6IE36 1432 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 NEMP1O14524 444 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms