RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 UBXN11Q5T124 520 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 KRT39Q6A163 491 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TWF2Q6IBS0 349 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GBP6Q6ZN66 633 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 HERC6Q8IVU3 1022 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 THNSL1Q8IYQ7 743 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZSWIM2Q8NEG5 633 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ACAP3Q96P50 834 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 IFIH1Q9BYX4 1025 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 EDEM3Q9BZQ6 932 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FAM50BQ9Y247 325 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 DERAQ9Y315 318 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 COQ4Q9Y3A0 265 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 H0Y858 1186 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZNF623O75123 536 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CXCL10P02778 98 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TPM1P09493 284 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CD52P31358 61 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 NBL1P41271 181 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GSDMDP57764 484 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 MYL7Q01449 175 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 NFX1Q12986 1120 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SYCP1Q15431 976 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 EXOC3L4Q17RC7 722 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZBTB41Q5SVQ8 909 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 C1orf220Q5T0J3 134 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 RSPH1Q8WYR4 309 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SCLYQ96I15 445 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PLCB1Q9NQ66 1216 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TLR9Q9NR96 1032 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 C1orf112Q9NSG2 853 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FAM105AQ9NUU6 356 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SIK3Q9Y2K2 1263 aa13.29□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GPR179Q6PRD1 2367 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 A0A1W2PQJ5 194 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 LCHNA4D1U4 455 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TRIM49P0CI25 452 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TRIM49CP0CI26 452 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 DLATP10515 647 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TNNI1P19237 187 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TNFSF9P41273 254 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PPP3CAQ08209 521 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 ZACNQ401N2 412 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PLEKHG4Q58EX7 1191 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 C15orf39Q6ZRI6 1047 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 MRPL10Q7Z7H8 261 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CDR2LQ86X02 465 aaPredicted RBP13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CEP120Q8N960 986 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 SEPT8Q92599 483 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 FAM81BQ96LP2 452 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 EIF2AQ9BY44 585 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 PDE11AQ9HCR9 933 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 GCNT4Q9P109 453 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 IPPQ9Y573 584 aa13.28□□□□□ -0.28
CACNA1C-IT3-201ENST00000542680 A0A0U1RQF3 1178 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 XPOTO43592 962 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CXCL8P10145 99 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 DLG4P78352 724 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 COL19A1Q14993 1142 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 DUOXA2Q1HG44 320 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SLC10A6Q3KNW5 377 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CBWD6Q4V339 395 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 XKR4Q5GH76 650 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CBWD3Q5JTY5 395 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CBWD5Q5RIA9 395 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 DGLUCYQ7Z3D6 616 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CNGA4Q8IV77 575 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 FMNL3Q8IVF7 1028 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CACTINQ8WUQ7 758 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PGBD4Q96DM1 585 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 FAXDC2Q96IV6 333 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ANKRD36BP1Q96IX9 119 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TTYH3Q9C0H2 523 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TMEM117Q9H0C3 514 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TMX1Q9H3N1 280 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NXF3Q9H4D5 531 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 RGS18Q9NS28 235 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 GIT1Q9Y2X7 761 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NBNO60934 754 aa13.26□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 RECQL4O94761 1208 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms