RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 UBA1P22314 1058 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ZNF132P52740 706 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 C1QBPQ07021 282 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 PTK6Q13882 451 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ODF2Q5BJF6 829 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 FAM43BQ6ZT52 329 aaPredicted RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 TRMT10CQ7L0Y3 403 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 RIOX2Q8IUF8 465 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ABRAQ8N0Z2 381 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 TMEM143Q96AN5 459 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 DDX27Q96GQ7 796 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 APOBEC3GQ9HC16 384 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 HOMER3Q9NSC5 361 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 KIAA1522Q9P206 1035 aaPredicted RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 CD2APQ9Y5K6 639 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 DCDC2CA8MYV0 355 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 E7EVH7 732 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 MEFVO15553 781 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ADCY3O60266 1144 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CAND2O75155 1236 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ZBTB7AO95365 584 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SHBGP04278 402 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ITIH2P19823 946 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GNA15P30679 374 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ACOT2P49753 483 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CAV1Q03135 178 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 KRT17Q04695 432 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CALCOCO2Q13137 446 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CAPSQ13938 189 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 NEDD9Q14511 834 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PPP1R7Q15435 360 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 TNFAIP8L3Q5GJ75 292 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 FAM160B1Q5W0V3 765 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 LMBRD2Q68DH5 695 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PLEKHA7Q6IQ23 1121 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 MFSD5Q6N075 450 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 RHBDF2Q6PJF5 856 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 BRSK2Q8IWQ3 736 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ANKRD35Q8N283 1001 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 UBR7Q8N806 425 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 TRPM4Q8TD43 1214 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ROPN1BQ9BZX4 212 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 RABEP2Q9H5N1 569 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ROPN1Q9HAT0 212 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 NRBP2Q9NSY0 501 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GGA3Q9NZ52 723 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 OTOFQ9HC10 1997 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GSTTP1A0A1W2PQM5 241 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GAS2O43903 313 aaKnown RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 MAFO75444 373 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 KIAA0754O94854 1291 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GAS8O95995 478 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 MMP13P45452 471 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 EFNA5P52803 228 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SEC24CP53992 1094 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 NOP14P78316 857 aaKnown RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 KLF1Q13351 362 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SLC29A2Q14542 456 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CDCA2Q69YH5 1023 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SPOPLQ6IQ16 392 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 WDR49Q8IV35 697 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 RHOT1Q8IXI2 618 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 KATNAL2Q8IYT4 538 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 RBBP8NLQ8NC74 664 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CPA5Q8WXQ8 436 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 CYFIP2Q96F07 1278 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 FAM167AQ96KS9 214 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PCYT2Q99447 389 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 TARS2Q9BW92 718 aaKnown RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 DCLK3Q9C098 648 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SEMA4AQ9H3S1 761 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 GPRC5DQ9NZD1 345 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 TP73O15350 636 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 EDN1P05305 212 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 TGFB3P10600 412 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 KCNJ1P48048 391 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 NCOA4Q13772 614 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 KCTD19Q17RG1 926 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ERMARDQ5T6L9 678 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PRAMEF18Q5VWM3 479 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 C6orf89Q6UWU4 347 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 METTL7BQ6UX53 244 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 RAPGEF5Q92565 580 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ELMO3Q96BJ8 720 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SNF8Q96H20 258 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ZBTB45Q96K62 511 aaPredicted RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 FAM84AQ96KN4 292 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 IMPG2Q9BZV3 1241 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 TRIM7Q9C029 511 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 LRRC4CQ9HCJ2 640 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PPANQ9NQ55 473 aaKnown RBP6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ADAM22Q9P0K1 906 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 ANKFY1Q9P2R3 1169 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 FZD1Q9UP38 647 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PTPN22Q9Y2R2 807 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 NUB1Q9Y5A7 615 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 PCDHB4Q9Y5E5 795 aa6.97□□□□□ -1.29
PTPRO-208ENST00000542557 SNCAIPQ9Y6H5 919 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms