RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	MROH7	Q68CQ1	1323 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	INHA	P05111	366 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	GTF2B	Q00403	316 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	MDM2	Q00987	491 aa	Predicted RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	GRB14	Q14449	540 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	FAM71B	Q8TC56	605 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	CELF4	Q9BZC1	486 aa	Known RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	IRX2	Q9BZI1	471 aa	Predicted RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	SLITRK6	Q9H5Y7	841 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	FAM114A2	Q9NRY5	505 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	KANSL3	Q9P2N6	904 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	DDX20	Q9UHI6	824 aa	Known RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	SSU72P8	A0A1W2PR75	194 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	GOLGA8K	D6RF30	607 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	MYBL1	P10243	752 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	PPM1F	P49593	454 aa	Predicted RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	SH3TC2	Q8TF17	1288 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	PI4K2A	Q9BTU6	479 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	FUCA2	Q9BTY2	467 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	TRIM62	Q9BVG3	475 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	RPTOR	Q8N122	1335 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	KRT1	P04264	644 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	CXCL8	P10145	99 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZNF18	P17022	549 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	CCZ1B	P86790	482 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	CCZ1	P86791	482 aa	Predicted RBP	13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ITGA7	Q13683	1181 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	CAPS	Q13938	189 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	TRIM59	Q8IWR1	403 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	P3H4	Q92791	437 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	DDX27	Q96GQ7	796 aa	Known RBP	13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	HOMER3	Q9NSC5	361 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	SNTG2	Q9NY99	539 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ATP8A1	Q9Y2Q0	1164 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328		M0R2N6	131 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ATP8B1	O43520	1251 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	EVI5	O60447	810 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	PDGFRB	P09619	1106 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	KRT17	Q04695	432 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	CDKAL1	Q5VV42	579 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	E4F1	Q66K89	784 aa	Predicted RBP	13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	TRAPPC11	Q7Z392	1133 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	BRSK2	Q8IWQ3	736 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	TMEM161B	Q8NDZ6	487 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ASNSD1	Q9NWL6	643 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	NAV1	Q8NEY1	1877 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328		A0A1W2PQJ5	194 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	LRRD1	A4D1F6	860 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	KLRC4	O43908	158 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	WEE2	P0C1S8	567 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	HSPA6	P17066	643 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	SDC4	P31431	198 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	STX2	P32856	288 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	RFX6	Q8HWS3	928 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	CALN1	Q9BXU9	219 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZNF831	Q5JPB2	1677 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	MYH7	P12883	1935 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	SMIM35	A0A1B0GVV1	85 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	FGG	P02679	453 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	ODC1	P11926	461 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	GBP1	P32455	592 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	PTEN	P60484	403 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	FYB2	Q5VWT5	728 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	PLCD3	Q8N3E9	789 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	BBOF1	Q8ND07	529 aa		13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	NIFK	Q9BYG3	293 aa	Known RBP	13.13	□□□□□ -0.31
ABCB8-222	ENST00000542328	SGK1	O00141	431 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ASGR1	P07306	291 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	DYNLT1	P63172	113 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	SARNP	P82979	210 aa	Known RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	LMNB2	Q03252	620 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ECM1	Q16610	540 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	TRIM65	Q6PJ69	517 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	SV2A	Q7L0J3	742 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	NT5DC4	Q86YG4	428 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ABCB6	Q9NP58	842 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	AGPAT5	Q9NUQ2	364 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	TNFSF13B	Q9Y275	285 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ANO9	A1A5B4	782 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ECEL1	O95672	775 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	GNL1	P36915	607 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	CRYBB1	P53674	252 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	CUL2	Q13617	745 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	CCL14	Q16627	93 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	WDR24	Q96S15	920 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	WDR35	Q9P2L0	1181 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	PGAP2	Q9UHJ9	254 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	GTPBP10	A4D1E9	387 aa	Known RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZBTB24	O43167	697 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	MAN1A1	P33908	653 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	KCNA10	Q16322	511 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZSCAN26	Q16670	478 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	CDO1	Q16878	200 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	OLFML2B	Q68BL8	750 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZBTB45	Q96K62	511 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	INTS13	Q9NVM9	706 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	NR2E3	Q9Y5X4	410 aa		13.12	□□□□□ -0.31
ABCB8-222	ENST00000542328	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms