RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.792e-9■■■■■ 223.6
DDX55-208ENST00000541259 DPP3Q9NY33 737 aa10.09□□□□□ -0.79
DDX55-208ENST00000541259 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
DDX55-208ENST00000541259 SIX4Q9UIU6 781 aa10.09□□□□□ -0.79
DDX55-208ENST00000541259 DERAQ9Y315 318 aa10.09□□□□□ -0.79
DDX55-208ENST00000541259 C2CD2Q9Y426 696 aa10.09□□□□□ -0.79
DDX55-208ENST00000541259 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 TBKBP1A7MCY6 615 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 H0YGN5 161 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PPEF2O14830 753 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 INPPL1O15357 1258 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 STX10O60499 249 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 EFCAB14O75071 495 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 DGKIO75912 1065 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 DDHD2O94830 711 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 ADCY5O95622 1261 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 HLA-DRAP01903 254 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 TNNC2P02585 160 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 AMHP03971 560 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 ITGB3P05106 788 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 THP07101 528 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 TPM2P07951 284 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 TMEM191BP0C7N4 346 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 SLC9A1P19634 815 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PBX1P40424 430 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 RGS19P49795 217 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 MYL7Q01449 175 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 BIRC3Q13489 604 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 FILIP1LQ4L180 1135 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PAN2Q504Q3 1202 aaKnown RBP10.08□□□□□ -0.8
DDX55-208ENST00000541259 EPC2Q52LR7 807 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 NOMO2Q5JPE7 1267 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 C9orf50Q5SZB4 431 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 KRT39Q6A163 491 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 DPY19L2P1Q6NXN4 242 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PSRC1Q6PGN9 363 aaPredicted RBP10.08□□□□□ -0.8
DDX55-208ENST00000541259 GLB1LQ6UWU2 654 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 USP37Q86T82 979 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 ZNF280BQ86YH2 543 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 C1orf127Q8N9H9 656 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 EHBP1Q8NDI1 1231 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 LMO3Q8TAP4 145 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 CACTINQ8WUQ7 758 aaKnown RBP10.08□□□□□ -0.8
DDX55-208ENST00000541259 HERVK_113Q902F9 699 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 RABGGTAQ92696 567 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 ANKRD36BP1Q96IX9 119 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PAAF1Q9BRP4 392 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PI4K2AQ9BTU6 479 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 TBC1D13Q9NVG8 400 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 UBQLN1Q9UMX0 589 aaKnown RBP10.08□□□□□ -0.8
DDX55-208ENST00000541259 ADGRG1Q9Y653 693 aa10.08□□□□□ -0.8
DDX55-208ENST00000541259 PMM2O15305 246 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 CBFA2T2O43439 604 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 PHACTR2O75167 634 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 KRT19P08727 400 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 PON1P27169 355 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 KCNJ6P48051 423 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 AP3M2P53677 418 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 MYL6P60660 151 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 LRMPQ12912 555 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 SYCP1Q15431 976 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 SHHQ15465 462 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 FKBP15Q5T1M5 1219 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 NT5DC4Q86YG4 428 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 FBXL13Q8NEE6 735 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 BEST2Q8NFU1 509 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 TATDN2Q93075 761 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 ERGIC2Q96RQ1 377 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 INTS2Q9H0H0 1204 aaKnown RBP10.07□□□□□ -0.8
DDX55-208ENST00000541259 AGAP1Q9UPQ3 857 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 SIK3Q9Y2K2 1263 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 COQ4Q9Y3A0 265 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 VWA8A3KMH1 1905 aa10.07□□□□□ -0.8
DDX55-208ENST00000541259 ANO9A1A5B4 782 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 CASTOR2A6NHX0 329 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 F8W810 466 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 PIRO00625 290 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 EPHB6O15197 1021 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 P4HA2O15460 535 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 HOXA2O43364 376 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 N4BP1O75113 896 aaKnown RBP10.06□□□□□ -0.8
DDX55-208ENST00000541259 CYP3A5P20815 502 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 POLR2BP30876 1174 aaKnown RBP10.06□□□□□ -0.8
DDX55-208ENST00000541259 PIK3CAP42336 1068 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 CLCNKBP51801 687 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 GRIK3Q13003 919 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 NCOA4Q13772 614 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 EXOC3L4Q17RC7 722 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 RASIP1Q5U651 963 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 C9orf57Q5W0N0 161 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 SPOPLQ6IQ16 392 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 GJB7Q6PEY0 223 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 ABI1Q8IZP0 508 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 URGCPQ8TCY9 931 aa10.06□□□□□ -0.8
DDX55-208ENST00000541259 ZNF689Q96CS4 500 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms