RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 DDX23Q9BUQ8 820 aaKnown RBP15.42■□□□□ 0.06
SNHG1-213ENST00000540725 CYP4F11Q9HBI6 524 aa15.42■□□□□ 0.06
SNHG1-213ENST00000540725 TUBGCP4Q9UGJ1 667 aa15.42■□□□□ 0.06
SNHG1-213ENST00000540725 INSL5Q9Y5Q6 135 aa15.42■□□□□ 0.06
SNHG1-213ENST00000540725 R4GN57 208 aa15.42■□□□□ 0.06
SNHG1-213ENST00000540725 DMXL1Q9Y485 3027 aa15.42■□□□□ 0.06
SNHG1-213ENST00000540725 ECI2O75521 394 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 SEC24AO95486 1093 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 TPGS2Q68CL5 300 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 POTEHQ6S545 545 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 APPL2Q8NEU8 664 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 KCNG4Q8TDN1 519 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 DDX12PQ92771 950 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 BICD1Q96G01 975 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 CORO1BQ9BR76 489 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 HAPLN2Q9GZV7 340 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 SEMA4AQ9H3S1 761 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 LARSQ9P2J5 1176 aaKnown RBP15.41■□□□□ 0.06
SNHG1-213ENST00000540725 DCHS1Q96JQ0 3298 aa15.41■□□□□ 0.06
SNHG1-213ENST00000540725 TICRRQ7Z2Z1 1910 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 H0YCG3 227 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 CD2BP2O95400 341 aaKnown RBP15.4■□□□□ 0.06
SNHG1-213ENST00000540725 LMNAP02545 664 aaKnown RBP15.4■□□□□ 0.06
SNHG1-213ENST00000540725 CLTAP09496 248 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 SP9P0CG40 484 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 UBXN2BQ14CS0 331 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 PRSS36Q5K4E3 855 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 HAUS6Q7Z4H7 955 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 TMEM130Q8N3G9 435 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 TCEAL4Q96EI5 215 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 PLA2G2FQ9BZM2 168 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 PLEKHA5Q9HAU0 1116 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 AFF4Q9UHB7 1163 aaKnown RBP15.4■□□□□ 0.06
SNHG1-213ENST00000540725 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 TCHHQ07283 1943 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 SCN1AP35498 2009 aa15.4■□□□□ 0.06
SNHG1-213ENST00000540725 TTC26A0AVF1 554 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 ZNF197O14709 1029 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 CPB1P15086 417 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
SNHG1-213ENST00000540725 LRPAP1P30533 357 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 SPAG1Q07617 926 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 ADCY1Q08828 1119 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 TANGO2Q6ICL3 276 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 ZC3H14Q6PJT7 736 aaKnown RBP15.39■□□□□ 0.05
SNHG1-213ENST00000540725 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 ELMOD1Q8N336 334 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 KIF12Q96FN5 646 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 AK8Q96MA6 479 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 REEP2Q9BRK0 252 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 BCO2Q9BYV7 579 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 OSBPL6Q9BZF3 934 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 LTB4R2Q9NPC1 389 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 ODF2LQ9ULJ1 636 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 MTF2Q9Y483 593 aaPredicted RBP15.39■□□□□ 0.05
SNHG1-213ENST00000540725 COL4A2P08572 1712 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 TSC2P49815 1807 aa15.39■□□□□ 0.05
SNHG1-213ENST00000540725 FAM170BA6NMN3 283 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 M0QZQ0 153 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 SLC26A4O43511 780 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 CD72P21854 359 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 FCARP24071 287 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 UBA7P41226 1012 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 TNFSF9P41273 254 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 CCR2P41597 374 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 LIG4P49917 911 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 PPP2R3AQ06190 1150 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 DHX8Q14562 1220 aaKnown RBP15.38■□□□□ 0.05
SNHG1-213ENST00000540725 CYP4A22Q5TCH4 519 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 TPRG1Q6ZUI0 275 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 PDZD4Q76G19 769 aaPredicted RBP15.38■□□□□ 0.05
SNHG1-213ENST00000540725 LRRC15Q8TF66 581 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 KCNN1Q92952 543 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 ELSPBP1Q96BH3 223 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 CALML4Q96GE6 196 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 MAFFQ9ULX9 164 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 UBQLN1Q9UMX0 589 aaKnown RBP15.38■□□□□ 0.05
SNHG1-213ENST00000540725 SMC3Q9UQE7 1217 aa15.38■□□□□ 0.05
SNHG1-213ENST00000540725 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.38■□□□□ 0.05
SNHG1-213ENST00000540725 LACTBL1A8MY62 500 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 K7ENM7 598 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 NRG2O14511 850 aaPredicted RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 HNRNPDLO14979 420 aaKnown RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 MICAL2O94851 1124 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 FAM13AO94988 1023 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 CYP3A5P20815 502 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 AARSP49588 968 aaKnown RBP eCLIP15.37■□□□□ 0.055e-21■□□□□ 9.8
SNHG1-213ENST00000540725 YWHAHQ04917 246 aaPredicted RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 TWF1Q12792 350 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 ZBTB6Q15916 424 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 KYAT1Q16773 422 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 FAM78AQ5JUQ0 283 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 MAML2Q8IZL2 1156 aaPredicted RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 ZNF512Q96ME7 567 aaPredicted RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 BLOC1S4Q9NUP1 217 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms