RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TMEM270Q6UE05 265 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 RSPH3Q86UC2 560 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 NME8Q8N427 588 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 RNF10Q8N5U6 811 aaKnown RBP10.24□□□□□ -0.77
PAAF1-209ENST00000540659 EPS8L1Q8TE68 723 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 TMEM40Q8WWA1 233 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 ACAP3Q96P50 834 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 PCDHB18PQ96TA0 734 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 SYT11Q9BT88 431 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 EIF2AQ9BY44 585 aaKnown RBP10.24□□□□□ -0.77
PAAF1-209ENST00000540659 TRIM6Q9C030 488 aaPredicted RBP10.24□□□□□ -0.77
PAAF1-209ENST00000540659 PDCL3Q9H2J4 239 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 GTF2IRD1Q9UHL9 959 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 NOCTQ9UK39 431 aaKnown RBP10.24□□□□□ -0.77
PAAF1-209ENST00000540659 POLIQ9UNA4 740 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
PAAF1-209ENST00000540659 SAR1BQ9Y6B6 198 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 MROH7Q68CQ1 1323 aa10.24□□□□□ -0.77
PAAF1-209ENST00000540659 ANO9A1A5B4 782 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 M0QZ92 97 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 FTCDO95954 541 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 CTSHP09668 335 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 TMEM253P0C7T8 217 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 TBXAS1P24557 533 aaPredicted RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 GRM5P41594 1212 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 RAP1GAPP47736 663 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 GJA8P48165 433 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 GUCY2FP51841 1108 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 RBM10P98175 930 aaKnown RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 AMPD2Q01433 879 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 CDR2Q01850 454 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 TMEM132DQ14C87 1099 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 SNX17Q15036 470 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 SGSM1Q2NKQ1 1148 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 TEX35Q5T0J7 233 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 SMYD5Q6GMV2 418 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 NOTUMQ6P988 496 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 RNF180Q86T96 592 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 CEP112Q8N8E3 955 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 RBBP8NLQ8NC74 664 aaPredicted RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 CAGE1Q8TC20 777 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 ARHGEF26Q96DR7 871 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 KIF12Q96FN5 646 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 PSMB7Q99436 277 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 CCDC94Q9BW85 323 aaPredicted RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 THAP2Q9H0W7 228 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 RNF19AQ9NV58 838 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 PACSIN2Q9UNF0 486 aaPredicted RBP10.23□□□□□ -0.77
PAAF1-209ENST00000540659 JRKLQ9Y4A0 524 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 MYH10P35580 1976 aa10.23□□□□□ -0.77
PAAF1-209ENST00000540659 GRID2IPA4D2P6 1211 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 BTNL10A8MVZ5 291 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ZNF185O15231 689 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 THAP12O43422 761 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 RTN2O75298 545 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ASS1P00966 412 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 FTLP02792 175 aaPredicted RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ACO1P21399 889 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 EIF4BP23588 611 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 AKAP5P24588 427 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 GNA15P30679 374 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 POLR2BP30876 1174 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 CXCR5P32302 372 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 CRYBB1P53674 252 aaPredicted RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 YARSP54577 528 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 NKX3-2P78367 333 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ELF2Q15723 593 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 IFI16Q16666 785 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ERCC6LQ2NKX8 1250 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ZNF394Q53GI3 561 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 PAPD7Q5XG87 772 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 PASD1Q8IV76 773 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 C1orf127Q8N9H9 656 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ARRDC4Q8NCT1 418 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 SLC35G2Q8TBE7 412 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 DDX1Q92499 740 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 WNT8BQ93098 351 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 CELF4Q9BZC1 486 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 GOLPH3Q9H4A6 298 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 NXF3Q9H4D5 531 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ASB7Q9H672 318 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 OSGEPQ9NPF4 335 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 PARP2Q9UGN5 583 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 DDX20Q9UHI6 824 aaKnown RBP10.22□□□□□ -0.77
PAAF1-209ENST00000540659 INTUQ9ULD6 942 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 HYOU1Q9Y4L1 999 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 HES2Q9Y543 173 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 TRPV2Q9Y5S1 764 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 CDY2AQ9Y6F7 541 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 ALPK3Q96L96 1907 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 TRIP11Q15643 1979 aa10.22□□□□□ -0.77
PAAF1-209ENST00000540659 NCANO14594 1321 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms