RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 TM9SF1O15321 606 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-203ENST00000540357 ROR1Q01973 937 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 C3orf62Q6ZUJ4 267 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 HSPH1Q92598 858 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 SCYL1Q96KG9 808 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 DRC3Q9H069 523 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 SLC9A2Q9UBY0 812 aa13.73□□□□□ -0.21
DNMT1-203ENST00000540357 ATP9AO75110 1047 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 SLC12A2P55011 1212 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 PSMC5P62195 406 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 KRT76Q01546 638 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 SLC34A1Q06495 639 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 PTK7Q13308 1070 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
DNMT1-203ENST00000540357 PDZD4Q76G19 769 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-203ENST00000540357 PPIL6Q8IXY8 311 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CEP70Q8NHQ1 597 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 THTPAQ9BU02 230 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 TMEM109Q9BVC6 243 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-203ENST00000540357 KCTD10Q9H3F6 313 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ATP8B3O60423 1300 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 A8MXQ7 604 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 MX2P20592 715 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CRKP46108 304 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ALDH18A1P54886 795 aaKnown RBP13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CCDC15Q0P6D6 951 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 MORF4L2Q15014 288 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ZNF720Q7Z2F6 126 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 LRRC57Q8N9N7 239 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 LNX1Q8TBB1 728 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CDHR1Q96JP9 859 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 BTBD10Q9BSF8 475 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 PI4K2BG5E9Z4 385 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 H3BRJ5 948 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CCND2P30279 289 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 KIF22Q14807 665 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 GEN1Q17RS7 908 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 PARP6Q2NL67 630 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 TRIM33Q9UPN9 1127 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 KLHL2O95198 593 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 HSPA4LO95757 839 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CYP11B1P15538 503 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
DNMT1-203ENST00000540357 LAMB3Q13751 1172 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 EXOC3L1Q86VI1 746 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 ACAP3Q96P50 834 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
DNMT1-203ENST00000540357 SREBF1P36956 1147 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-203ENST00000540357 SLC10A5Q5PT55 438 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.71□□□□□ -0.21
DNMT1-203ENST00000540357 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 CACNA2D1P54289 1103 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 SLC13A1Q9BZW2 595 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.21
DNMT1-203ENST00000540357 EMC10Q5UCC4 262 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 TMEM237Q96Q45 408 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 FRMD8P1Q9BZ68 369 aaPredicted RBP13.71□□□□□ -0.22
DNMT1-203ENST00000540357 MRPL40Q9NQ50 206 aaKnown RBP13.71□□□□□ -0.22
DNMT1-203ENST00000540357 HESX1Q9UBX0 185 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.22
DNMT1-203ENST00000540357 ROBO3Q96MS0 1386 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 K7ERI5 159 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 KRT16P08779 473 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 EPHB2P29323 1055 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 YWHABP31946 246 aaKnown RBP13.71□□□□□ -0.22
DNMT1-203ENST00000540357 PIGWQ7Z7B1 504 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 PRELID2Q8N945 189 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 RTFDC1Q9BY42 306 aaPredicted RBP13.71□□□□□ -0.22
DNMT1-203ENST00000540357 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 KLHL11Q9NVR0 708 aa13.71□□□□□ -0.22
DNMT1-203ENST00000540357 KCNQ4P56696 695 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 BNIP1Q12981 228 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 PPP2R5DQ14738 602 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 SLC45A4Q5BKX6 768 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 TTC39BQ5VTQ0 682 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-203ENST00000540357 PIK3R5Q8WYR1 880 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 SLC12A4Q9UP95 1085 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 OVGP1Q12889 678 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms