RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 GPR88Q9GZN0 384 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 C8orf33Q9H7E9 229 aaPredicted RBP12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 CEP72Q9P209 647 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
CLSTN3-209ENST00000539982 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 CHADO15335 359 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 REC8O95072 547 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 MYL4P12829 197 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 GJA1P17302 382 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 CYP11B2P19099 503 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 EFNA5P52803 228 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 EPHA5P54756 1037 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 SOX4Q06945 474 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 SCRN1Q12765 414 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 NR5A1Q13285 461 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 AASDHQ4L235 1098 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 XKR4Q5GH76 650 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 ALKAL1Q6UXT8 129 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 APBB1IPQ7Z5R6 666 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 YAF2Q8IY57 180 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 MTMR9Q96QG7 549 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 RBM12Q9NTZ6 932 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
CLSTN3-209ENST00000539982 PODXLO00592 558 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 AXIN1O15169 862 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 KRT2P35908 639 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 YARSP54577 528 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 TWF1Q12792 350 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 TEAD2Q15562 447 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 Q6ZS52 159 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 WASF1Q92558 559 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 LOXL4Q96JB6 756 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 RALYQ9UKM9 306 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 TNFSF13BQ9Y275 285 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 TRIP11Q15643 1979 aa12.76□□□□□ -0.37
CLSTN3-209ENST00000539982 MYBPHLA2RUH7 354 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 SLC38A8A6NNN8 435 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 NCANO14594 1321 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 NEMFO60524 1076 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 MED24O75448 989 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 GRM5P41594 1212 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 SOX9P48436 509 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 SF3A2Q15428 464 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 RALGPS2Q86X27 583 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 SYNPOQ8N3V7 929 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 RSPRY1Q96DX4 576 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 C2orf42Q9NWW7 574 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 CEP295Q9C0D2 2601 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 BAHCC1Q9P281 2608 aa12.75□□□□□ -0.37
CLSTN3-209ENST00000539982 ARHGEF35A5YM69 484 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 SPECC1L-ADORA2AF8WAN1 911 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 K7ERI5 159 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 DTNBO60941 627 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 PROS1P07225 676 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 KCNE1P15382 129 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 STPG1Q5TH74 334 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 TXNDC11Q6PKC3 985 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 RNF19BQ6ZMZ0 732 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 APPL2Q8NEU8 664 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 SUSD3Q96L08 255 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 ZMAT2Q96NC0 199 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 KIFC3Q9BVG8 833 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 LRRC3Q9BY71 257 aa12.74□□□□□ -0.37
CLSTN3-209ENST00000539982 RXFP3Q9NSD7 469 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms