RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 C9orf57Q5W0N0 161 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 DCLRE1AQ6PJP8 1040 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 C15orf39Q6ZRI6 1047 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 FBXL13Q8NEE6 735 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 FAM84AQ96KN4 292 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 ZNF560Q96MR9 790 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 COLEC11Q9BWP8 271 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 HCSTQ9UBK5 93 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 RWDD3Q9Y3V2 267 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 PCDHB12Q9Y5F1 795 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 ANO9A1A5B4 782 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 LCHNA4D1U4 455 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 GALTP07902 379 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 PNPLA4P41247 253 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 PIK3CAP42336 1068 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 BCAR1P56945 870 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 SLC20A2Q08357 652 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 NCOA4Q13772 614 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 MIIPQ5JXC2 388 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 KCNT2Q6UVM3 1135 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 CLP1Q92989 425 aaKnown RBP16.62■□□□□ 0.25
DDB1-216ENST00000539739 PBX4Q9BYU1 374 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 IMPG2Q9BZV3 1241 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 TMEM51Q9NW97 253 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 SIX4Q9UIU6 781 aa16.62■□□□□ 0.25
DDB1-216ENST00000539739 PRG3Q9Y2Y8 225 aaPredicted RBP16.62■□□□□ 0.25
DDB1-216ENST00000539739 PIRO00625 290 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 NRP1O14786 923 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 B4GALT3O60512 393 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 B3GAT3O94766 335 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 CLSTN1O94985 981 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 CST3P01034 146 aaPredicted RBP16.61■□□□□ 0.25
DDB1-216ENST00000539739 HLA-DRAP01903 254 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 CA3P07451 260 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 MYOGP15173 224 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 PAX3P23760 479 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 ATICP31939 592 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 SLC11A1P49279 550 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 SMAD3P84022 425 aaKnown RBP16.61■□□□□ 0.25
DDB1-216ENST00000539739 FANCCQ00597 558 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 LRRC52Q8N7C0 313 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 COLGALT1Q8NBJ5 622 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 RAB20Q9NX57 234 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 COLQQ9Y215 455 aaPredicted RBP16.61■□□□□ 0.25
DDB1-216ENST00000539739 COQ4Q9Y3A0 265 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 NUB1Q9Y5A7 615 aa16.61■□□□□ 0.25
DDB1-216ENST00000539739 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
DDB1-216ENST00000539739 COL4A6Q14031 1691 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 GTPBP10A4D1E9 387 aaKnown RBP16.6■□□□□ 0.25
DDB1-216ENST00000539739 LINC01553A4QN01 128 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 TADA2AO75478 443 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 PPM1AP35813 382 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 TAF6P49848 677 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 UBASH3AP57075 661 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 SGSM1Q2NKQ1 1148 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 UVSSAQ2YD98 709 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 APTXQ7Z2E3 356 aaKnown RBP16.6■□□□□ 0.25
DDB1-216ENST00000539739 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 TAS1R2Q8TE23 839 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 RABGGTAQ92696 567 aa16.6■□□□□ 0.25
DDB1-216ENST00000539739 LGALS16A8MUM7 142 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 NT5C1B-RDH14C9J2C7 533 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TMEM189-UBE2V1I3L0A0 370 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 DYNC1I1O14576 645 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TRAPPC3O43617 180 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 VNN1O95497 513 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TPM3P06753 285 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 PBX2P40425 430 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 MYL6P60660 151 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 SV2CQ496J9 727 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TMEM130Q8N3G9 435 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TAF4BQ92750 862 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 HPDLQ96IR7 371 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 SAMD11Q96NU1 681 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 SPG21Q9NZD8 308 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 YBX2Q9Y2T7 364 aaKnown RBP16.59■□□□□ 0.25
DDB1-216ENST00000539739 RANBP2P49792 3224 aaKnown RBP16.59■□□□□ 0.25
DDB1-216ENST00000539739 PPEF2O14830 753 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 BMPR1AP36894 532 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 PBX3P40426 434 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 LILRA4P59901 499 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 UBXN1Q04323 297 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 EXOC3L4Q17RC7 722 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 ZNF699Q32M78 642 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 EPC2Q52LR7 807 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TMEM169Q96HH4 297 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms