RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PRCCQ92733 491 aaPredicted RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 CFAP57Q96MR6 1250 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 RAB3IPQ96QF0 476 aaPredicted RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 NTPCRQ9BSD7 190 aaKnown RBP10.27□□□□□ -0.77
CDH13-204ENST00000539548 HEMGNQ9BXL5 484 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 TXLNGQ9NUQ3 528 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 FBXO28Q9NVF7 368 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 ADAM22Q9P0K1 906 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 TRIM33Q9UPN9 1127 aa10.27□□□□□ -0.77
CDH13-204ENST00000539548 TMEM150BA6NC51 233 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 A8MUI8 341 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 RASA4BC9J798 803 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 RASA4O43374 803 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 ASMTLO95671 621 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 CALCAP01258 141 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 VPS41P49754 854 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 MRPS9P82933 396 aaKnown RBP10.26□□□□□ -0.77
CDH13-204ENST00000539548 ATP11AP98196 1134 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 UGCGQ16739 394 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 PARP6Q2NL67 630 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 XKR9Q5GH70 373 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 SLC39A4Q6P5W5 647 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 C15orf39Q6ZRI6 1047 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 RGS9BPQ6ZS82 235 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 ANKS1BQ7Z6G8 1248 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 TRABD2AQ86V40 505 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 SEPT12Q8IYM1 358 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 EXD1Q8NHP7 514 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 FBF1Q8TES7 1133 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 C9orf72Q96LT7 481 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 RBM15Q96T37 977 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH13-204ENST00000539548 SH2D3AQ9BRG2 576 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 OSBPL8Q9BZF1 889 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 CCPG1Q9ULG6 757 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 STK38LQ9Y2H1 464 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 DENND3A2RUS2 1198 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 PRPF4O43172 522 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH13-204ENST00000539548 DIAPH2O60879 1101 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 FDX1P10109 184 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 CAP2P40123 477 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 NSFP46459 744 aaKnown RBP10.26□□□□□ -0.77
CDH13-204ENST00000539548 YARSP54577 528 aaKnown RBP10.26□□□□□ -0.77
CDH13-204ENST00000539548 TAS2R40P59535 323 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 MTMR1Q13613 665 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 CCDC142Q17RM4 750 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 MON1BQ7L1V2 547 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 MCF2L2Q86YR7 1114 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 FAM151AQ8WW52 585 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 CLEC4DQ8WXI8 215 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 ZNF622Q969S3 477 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH13-204ENST00000539548 VCPIP1Q96JH7 1222 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 TTC25Q96NG3 672 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 ANKRD27Q96NW4 1050 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 KMT5AQ9NQR1 393 aa10.26□□□□□ -0.77
CDH13-204ENST00000539548 GSTTP1A0A1W2PQM5 241 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 GARTP22102 1010 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 GCAP28676 217 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 JAK3P52333 1124 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 POLGP54098 1239 aaPredicted RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 DMP1Q13316 513 aaPredicted RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 SETDB1Q15047 1291 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 TMED2Q15363 201 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 TBC1D10BQ4KMP7 808 aaPredicted RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 TRIM72Q6ZMU5 477 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 PHLDB2Q86SQ0 1253 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 ERICH1Q86X53 443 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.77
CDH13-204ENST00000539548 GPD1LQ8N335 351 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 POMGNT1Q8WZA1 660 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 ELMO3Q96BJ8 720 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 ZNF570Q96NI8 536 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 PI4K2AQ9BTU6 479 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 MYLK2Q9H1R3 596 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 LRMDAQ9H2I8 198 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 C17orf75Q9HAS0 396 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 ETNK1Q9HBU6 452 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 MRPL47Q9HD33 250 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 C1orf112Q9NSG2 853 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 SLC5A4Q9NY91 659 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 TMOD2Q9NZR1 351 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 USH1CQ9Y6N9 552 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 TCP10L2B9ZVM9 353 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 NFIBO00712 420 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 HMGB2P26583 209 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 SFNP31947 248 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 CETN2P41208 172 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 PSEN1P49768 467 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 CLDN10P78369 228 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 MOGSQ13724 837 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 SPARCL1Q14515 664 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 P3H1Q32P28 736 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 PLA2G4FQ68DD2 849 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms