RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 LRPAP1P30533 357 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 TAF6P49848 677 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 SCNN1GP51170 649 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 NCOA4Q13772 614 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 RAB30Q15771 203 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 SPECC1LQ69YQ0 1117 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 C16orf59Q7L2K0 433 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
CLPB-210ENST00000539148 JAKMIP2Q96AA8 810 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 NT5C1BQ96P26 610 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 ERGIC2Q96RQ1 377 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 GDF15Q99988 308 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 NAA15Q9BXJ9 866 aaKnown RBP11.01□□□□□ -0.65
CLPB-210ENST00000539148 MTMR12Q9C0I1 747 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
CLPB-210ENST00000539148 TBC1D13Q9NVG8 400 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 GCNT4Q9P109 453 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 MSRAQ9UJ68 235 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 DSEQ9UL01 958 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 FAN1Q9Y2M0 1017 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 COQ4Q9Y3A0 265 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 PAXBP1Q9Y5B6 917 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 NLRC5Q86WI3 1866 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 PTPRSQ13332 1948 aa11□□□□□ -0.65
CLPB-210ENST00000539148 PTGESO14684 152 aa11□□□□□ -0.65
CLPB-210ENST00000539148 KIF4AO95239 1232 aa11□□□□□ -0.65
CLPB-210ENST00000539148 C4BPAP04003 597 aaKnown RBP11□□□□□ -0.65
CLPB-210ENST00000539148 ITGB3P05106 788 aa11□□□□□ -0.65
CLPB-210ENST00000539148 FAM163BP0C2L3 166 aa11□□□□□ -0.65
CLPB-210ENST00000539148 CCDC172P0C7W6 258 aa11□□□□□ -0.65
CLPB-210ENST00000539148 SKILP12757 684 aa11□□□□□ -0.65
CLPB-210ENST00000539148 TNNC1P63316 161 aa11□□□□□ -0.65
CLPB-210ENST00000539148 DLG4P78352 724 aa11□□□□□ -0.65
CLPB-210ENST00000539148 DEFB103AP81534 67 aa11□□□□□ -0.65
CLPB-210ENST00000539148 HTRA4P83105 476 aaPredicted RBP11□□□□□ -0.65
CLPB-210ENST00000539148 KRT17Q04695 432 aa11□□□□□ -0.65
CLPB-210ENST00000539148 PPP3CAQ08209 521 aa11□□□□□ -0.65
CLPB-210ENST00000539148 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
CLPB-210ENST00000539148 ZNF699Q32M78 642 aa11□□□□□ -0.65
CLPB-210ENST00000539148 ZNF667Q5HYK9 610 aa11□□□□□ -0.65
CLPB-210ENST00000539148 GLRA4Q5JXX5 417 aa11□□□□□ -0.65
CLPB-210ENST00000539148 CLLU1OSQ5K130 101 aa11□□□□□ -0.65
CLPB-210ENST00000539148 RASIP1Q5U651 963 aa11□□□□□ -0.65
CLPB-210ENST00000539148 PDXDC1Q6P996 788 aa11□□□□□ -0.65
CLPB-210ENST00000539148 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
CLPB-210ENST00000539148 DPH6Q7L8W6 267 aa11□□□□□ -0.65
CLPB-210ENST00000539148 ZSWIM2Q8NEG5 633 aa11□□□□□ -0.65
CLPB-210ENST00000539148 NEK11Q8NG66 645 aa11□□□□□ -0.65
CLPB-210ENST00000539148 SPATA18Q8TC71 538 aa11□□□□□ -0.65
CLPB-210ENST00000539148 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
CLPB-210ENST00000539148 HPDLQ96IR7 371 aa11□□□□□ -0.65
CLPB-210ENST00000539148 ZNF558Q96NG5 402 aa11□□□□□ -0.65
CLPB-210ENST00000539148 CASD1Q96PB1 797 aa11□□□□□ -0.65
CLPB-210ENST00000539148 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
CLPB-210ENST00000539148 NUCKS1Q9H1E3 243 aaKnown RBP11□□□□□ -0.65
CLPB-210ENST00000539148 PUF60Q9UHX1 559 aaKnown RBP11□□□□□ -0.65
CLPB-210ENST00000539148 AGAP1Q9UPQ3 857 aa11□□□□□ -0.65
CLPB-210ENST00000539148 PCDHA11Q9Y5I1 949 aa11□□□□□ -0.65
CLPB-210ENST00000539148 ITIH6Q6UXX5 1313 aa11□□□□□ -0.65
CLPB-210ENST00000539148 TMEM189-UBE2V1I3L0A0 370 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 PODXLO00592 558 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 ZSCAN12O43309 604 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 HUS1O60921 280 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 TADA2AO75478 443 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 B3GAT3O94766 335 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 HLA-DRAP01903 254 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 POLR2BP30876 1174 aaKnown RBP10.99□□□□□ -0.65
CLPB-210ENST00000539148 OR1G1P47890 313 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 MFAP3P55082 362 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 DSC1Q08554 894 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 NR1I3Q14994 352 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 MIIPQ5JXC2 388 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 TDRD10Q5VZ19 366 aaKnown RBP10.99□□□□□ -0.65
CLPB-210ENST00000539148 C9orf57Q5W0N0 161 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 FAM117BQ6P1L5 589 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 CACNA2D4Q7Z3S7 1137 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 TMC6Q7Z403 805 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 PPFIBP1Q86W92 1011 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 METTL23Q86XA0 190 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 TDHQ8IZJ6 230 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 C1orf127Q8N9H9 656 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 APPL2Q8NEU8 664 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 OR5B17Q8NGF7 314 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 TMEM169Q96HH4 297 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 POP1Q99575 1024 aaKnown RBP10.99□□□□□ -0.65
CLPB-210ENST00000539148 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 OXCT2Q9BYC2 517 aaPredicted RBP10.99□□□□□ -0.65
CLPB-210ENST00000539148 HSD3B7Q9H2F3 369 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 PLCB1Q9NQ66 1216 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
CLPB-210ENST00000539148 SSX2IPQ9Y2D8 614 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms