RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 P4HA1P13674 534 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 RFX1P22670 979 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 PAX3P23760 479 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 MYL6P60660 151 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 SOX4Q06945 474 aaPredicted RBP15.25■□□□□ 0.03
PDE4C-204ENST00000539010 TRIM14Q14142 442 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 ZNF699Q32M78 642 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 FAM117BQ6P1L5 589 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 CMTR2Q8IYT2 770 aaKnown RBP15.25■□□□□ 0.03
PDE4C-204ENST00000539010 LMO3Q8TAP4 145 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 CXorf38Q8TB03 319 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 ZNF689Q96CS4 500 aaPredicted RBP15.25■□□□□ 0.03
PDE4C-204ENST00000539010 HPDLQ96IR7 371 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 FAXDC2Q96IV6 333 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 ZBED2Q9BTP6 218 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
PDE4C-204ENST00000539010 FAM207AQ9NSI2 230 aaPredicted RBP15.25■□□□□ 0.03
PDE4C-204ENST00000539010 CXXC1Q9P0U4 656 aaPredicted RBP15.25■□□□□ 0.03
PDE4C-204ENST00000539010 SCN1AP35498 2009 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 CASTOR2A6NHX0 329 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 PODXLO00592 558 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 GJB5O95377 273 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 ASS1P00966 412 aaKnown RBP15.24■□□□□ 0.03
PDE4C-204ENST00000539010 ATP2A2P16615 1042 aaKnown RBP15.24■□□□□ 0.03
PDE4C-204ENST00000539010 GATMP50440 423 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 NOP14P78316 857 aaKnown RBP15.24■□□□□ 0.03
PDE4C-204ENST00000539010 DSC1Q08554 894 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 FIGNQ5HY92 759 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 GOLGA2P5Q9HBQ8 144 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 APEX2Q9UBZ4 518 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 FBXL5Q9UKA1 691 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
PDE4C-204ENST00000539010 TBXAS1P24557 533 aaPredicted RBP15.23■□□□□ 0.03
PDE4C-204ENST00000539010 TAF6P49848 677 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 KLK7P49862 253 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 CLCNKBP51801 687 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 BTG3Q14201 252 aaPredicted RBP15.23■□□□□ 0.03
PDE4C-204ENST00000539010 PTPN21Q16825 1174 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 UPP1Q16831 310 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 SV2CQ496J9 727 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 PAN2Q504Q3 1202 aaKnown RBP15.23■□□□□ 0.03
PDE4C-204ENST00000539010 ZNF667Q5HYK9 610 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 RASIP1Q5U651 963 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 KLHDC7AQ5VTJ3 777 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 ZNF280BQ86YH2 543 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 COLGALT2Q8IYK4 626 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
PDE4C-204ENST00000539010 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 PI4K2AQ9BTU6 479 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 EDEM3Q9BZQ6 932 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 UBE2OQ9C0C9 1292 aaKnown RBP15.23■□□□□ 0.03
PDE4C-204ENST00000539010 NRDE2Q9H7Z3 1164 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
PDE4C-204ENST00000539010 DDHD2O94830 711 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 ALDH2P05091 517 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 OR1G1P47890 313 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 TNNC1P63316 161 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 LRMPQ12912 555 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 ENOSF1Q7L5Y1 443 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 HERC6Q8IVU3 1022 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 PPM1KQ8N3J5 372 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 RAD9AQ99638 391 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 XYLT2Q9H1B5 865 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 RC3H2Q9HBD1 1191 aaKnown RBP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 IMPACTQ9P2X3 320 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 H0YGN5 161 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 B3GAT3O94766 335 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 UCHL3P15374 230 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 MFAP3P55082 362 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 LILRA4P59901 499 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 HTRA4P83105 476 aaPredicted RBP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 GCNT1Q02742 428 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 SPOUT1Q5T280 376 aaKnown RBP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 TMCO2Q7Z6W1 182 aaPredicted RBP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 ZNF397Q8NF99 534 aaPredicted RBP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 GDF15Q99988 308 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 COLEC11Q9BWP8 271 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 NIF3L1Q9GZT8 377 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 SIX2Q9NPC8 291 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 UBE2TQ9NPD8 197 aaPredicted RBP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDE4C-204ENST00000539010 CEP72Q9P209 647 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 FAN1Q9Y2M0 1017 aa15.22■□□□□ 0.03
PDE4C-204ENST00000539010 A0A1W2PQJ5 194 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 ARHGEF37A1IGU5 675 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 KPNA7A9QM74 516 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 TMEM189-UBE2V1I3L0A0 370 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 TLL1O43897 1013 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 LRRN2O75325 713 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 ALDH7A1P49419 539 aaKnown RBP15.21■□□□□ 0.03
PDE4C-204ENST00000539010 POLR2FP61218 127 aaKnown RBP15.21■□□□□ 0.03
PDE4C-204ENST00000539010 YWHAEP62258 255 aaKnown RBP15.21■□□□□ 0.03
PDE4C-204ENST00000539010 SHHQ15465 462 aa15.21■□□□□ 0.03
PDE4C-204ENST00000539010 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms