RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PDXKO00764 312 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 AP5Z1O43299 807 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 EXTL3O43909 919 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 MGEA5O60502 916 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 CXCL14O95715 111 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 SCP2P22307 547 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 ADORA2BP29275 332 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 PMS1P54277 932 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 EPHB4P54760 987 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 POLR2FP61218 127 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 KCNH2Q12809 1159 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 LIN9Q5TKA1 542 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 VPS52Q8N1B4 723 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TMEM130Q8N3G9 435 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 ZNF513Q8N8E2 541 aaPredicted RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 TRIML1Q8N9V2 468 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 APBB2Q92870 758 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 NT5C1BQ96P26 610 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 ACBD3Q9H3P7 528 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 RABEP2Q9H5N1 569 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 KIAA1586Q9HCI6 787 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 KANSL3Q9P2N6 904 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TBX21Q9UL17 535 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 UBQLN1Q9UMX0 589 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 GPR32O75388 356 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 AKAP3O75969 853 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 SPATA1Q5VX52 437 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TDHQ8IZJ6 230 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 FAM149B1Q96BN6 582 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 OLFML3Q9NRN5 406 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TNFSF13BQ9Y275 285 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 MBLAC1A4D2B0 266 aaPredicted RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 AFPP02771 609 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 AXLP30530 894 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 NDUFV1P49821 464 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 WDR5P61964 334 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 RBP5P82980 135 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TSPY1Q01534 308 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 LRRC63Q05C16 580 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 GPM6BQ13491 265 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 CTXN3Q4LDR2 81 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TMEM270Q6UE05 265 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 Q7L0L9 218 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 ZNF280BQ86YH2 543 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 NPAS4Q8IUM7 802 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 MAP4K3Q8IVH8 894 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 HERC6Q8IVU3 1022 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 MRPL9Q9BYD2 267 aaKnown RBP9.41□□□□□ -0.9
GGA3-202ENST00000538886 SEZ6LQ9BYH1 1024 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TLE6Q9H808 572 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 DNAJB4Q9UDY4 337 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 TUBGCP4Q9UGJ1 667 aa9.41□□□□□ -0.9
GGA3-202ENST00000538886 A0A0U1RQF3 1178 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 CYB561D2O14569 222 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 EFCAB14O75071 495 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 MCF2P10911 925 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 PEX19P40855 299 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 CDH8P55286 799 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 MAPK7Q13164 816 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 MBTPS1Q14703 1052 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 TMEM240Q5SV17 173 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 RSRC2Q7L4I2 434 aaKnown RBP9.4□□□□□ -0.9
GGA3-202ENST00000538886 ADSSL1Q8N142 457 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 APPL2Q8NEU8 664 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 RAD9AQ99638 391 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 SEMA6BQ9H3T3 888 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 CYP4F11Q9HBI6 524 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 HESX1Q9UBX0 185 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 LAMA2P24043 3122 aaKnown RBP9.4□□□□□ -0.9
GGA3-202ENST00000538886 SMIM28A0A1B0GU29 152 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 PODXLO00592 558 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 STX10O60499 249 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 GJC1P36383 396 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 CDK7P50613 346 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 CLCNKBP51801 687 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 MYL6P60660 151 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 SURF1Q15526 300 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
GGA3-202ENST00000538886 ZPBP2Q6X784 338 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 LRRC43Q8N309 656 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 GDPD5Q8WTR4 605 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 RNF34Q969K3 372 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 C17orf80Q9BSJ5 609 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 ADAMTS10Q9H324 1103 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 TBC1D13Q9NVG8 400 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 TMEM161AQ9NX61 479 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 ARHGAP28Q9P2N2 729 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 ADAM21Q9UKJ8 722 aa9.4□□□□□ -0.9
GGA3-202ENST00000538886 A0A1B0GUA9 196 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 USP27XA6NNY8 438 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 PLA2G4AP47712 749 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 RAP1GAPP47736 663 aa9.4□□□□□ -0.91
GGA3-202ENST00000538886 FANCCQ00597 558 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms