RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NOTUMQ6P988 496 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 ANKMY2Q8IV38 441 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 PTPRN2Q92932 1015 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 AAASQ9NRG9 546 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 HDAC6Q9UBN7 1215 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 C5orf58C9J3I9 102 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 GNL1P36915 607 aaPredicted RBP17.66■□□□□ 0.42
SCARB1-205ENST00000538291 ARHGAP15Q53QZ3 475 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 LRRC8EQ6NSJ5 796 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.66■□□□□ 0.42
SCARB1-205ENST00000538291 IQGAP3Q86VI3 1631 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 HLA-DPA1P20036 260 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 HARS2P49590 506 aaKnown RBP17.65■□□□□ 0.42
SCARB1-205ENST00000538291 SNRPFP62306 86 aaKnown RBP17.65■□□□□ 0.42
SCARB1-205ENST00000538291 MTFR1Q15390 333 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 AP1ARQ63HQ0 302 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 PLA2G4FQ68DD2 849 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 USP31Q70CQ4 1352 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 AGR3Q8TD06 166 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 FAM161BQ96MY7 647 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 OLFML3Q9NRN5 406 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 PDHBP11177 359 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 AP2B1P63010 937 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 GRAMD1AQ96CP6 724 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 ARHGEF26Q96DR7 871 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 MCEEQ96PE7 176 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 FBXL5Q9UKA1 691 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 ANGPT2O15123 496 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 IL10P22301 178 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 SLC18A3Q16572 532 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 HPS3Q969F9 1004 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 ZNF512BQ96KM6 892 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-205ENST00000538291 FAM49BQ9NUQ9 324 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 SPDYAQ5MJ70 313 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 MYCBPQ99417 103 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-205ENST00000538291 UNC45AQ9H3U1 944 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 RAB6BQ9NRW1 208 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 SPATS2LQ9NUQ6 558 aaKnown RBP17.65■□□□□ 0.42
SCARB1-205ENST00000538291 AMACRQ9UHK6 382 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 IGSF9BQ9UPX0 1349 aa17.65■□□□□ 0.42
SCARB1-205ENST00000538291 TWF1Q12792 350 aa17.64■□□□□ 0.42
SCARB1-205ENST00000538291 STOX1Q6ZVD7 989 aa17.64■□□□□ 0.42
SCARB1-205ENST00000538291 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.42
SCARB1-205ENST00000538291 RASA1P20936 1047 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 PNPLA4P41247 253 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 KCTD17Q8N5Z5 321 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 SLC7A14Q8TBB6 771 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 LRRC14Q15048 493 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 EDRF1Q3B7T1 1238 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 EFHC1Q5JVL4 640 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 ANO5Q75V66 913 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 LRRC71Q8N4P6 559 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 AGBL3Q8NEM8 1001 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 ATP6V1G3Q96LB4 118 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 TMEM39BQ9GZU3 492 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 ZC3H7BQ9UGR2 993 aaKnown RBP17.64■□□□□ 0.41
SCARB1-205ENST00000538291 HLA-DRAP01903 254 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 RGS4P49798 205 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 PDK1Q15118 436 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 ADSSL1Q8N142 457 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 STX19Q8N4C7 294 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 CALML6Q8TD86 181 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 SLC16A10Q8TF71 515 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 COG1Q8WTW3 980 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 ABHD8Q96I13 439 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 PKP3Q9Y446 797 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 TARSL2A2RTX5 802 aaKnown RBP17.64■□□□□ 0.41
SCARB1-205ENST00000538291 STAG3L1P0CL83 205 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 MED21Q13503 144 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 USP10Q14694 798 aaKnown RBP17.64■□□□□ 0.41
SCARB1-205ENST00000538291 CHSY1Q86X52 802 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 SLC35G2Q8TBE7 412 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 ELMO2Q96JJ3 720 aa17.64■□□□□ 0.41
SCARB1-205ENST00000538291 DPEP1P16444 411 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 KIZQ2M2Z5 673 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
SCARB1-205ENST00000538291 ARHGAP18Q8N392 663 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 ANKEF1Q9NU02 776 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 NAGPAQ9UK23 515 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 UCHL3P15374 230 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 GALCP54803 685 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 MAP3K10Q02779 954 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 TRAPPC11Q7Z392 1133 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 IGDCC4Q8TDY8 1250 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 ATG4CQ96DT6 458 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 TMEM117Q9H0C3 514 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 PCDHB2Q9Y5E7 798 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 EXTL3O43909 919 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 KDM1AO60341 852 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 RHOBTB3O94955 611 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 LRG1P02750 347 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 ATP1A1P05023 1023 aaKnown RBP17.63■□□□□ 0.41
SCARB1-205ENST00000538291 SERPINB9P50453 376 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 CUL3Q13618 768 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 RDM1Q8NG50 284 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms