RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 C1orf112Q9NSG2 853 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 RASAL2Q9UJF2 1139 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 AGO2Q9UKV8 859 aaKnown RBP9.89□□□□□ -0.83
DDB1-211ENST00000538280 KCNH4Q9UQ05 1017 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
DDB1-211ENST00000538280 PTPRJQ12913 1337 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 MROH7Q68CQ1 1323 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 SOWAHBA6NEL2 793 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 PODXLO00592 558 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 FSCN2O14926 492 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 ATMINO43313 823 aaPredicted RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 FARP2O94887 1054 aaPredicted RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 PYGMP11217 842 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 ELNP15502 786 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 NR1D1P20393 614 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 UBA1P22314 1058 aaKnown RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 SLC1A1P43005 524 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 POLGP54098 1239 aaPredicted RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 NLRP11P59045 1033 aaKnown RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 BPIFB4P59827 614 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 CNTN2Q02246 1040 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 STRN3Q13033 797 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 CEP85LQ5SZL2 805 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 PPP1R2P3Q6NXS1 205 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 ZPBP2Q6X784 338 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 TRIM72Q6ZMU5 477 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 RUFY4Q6ZNE9 571 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 MON1BQ7L1V2 547 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 CYFIP1Q7L576 1253 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 CPNE8Q86YQ8 564 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 RAET1EQ8TD07 263 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 BICD1Q96G01 975 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 FMO2Q99518 471 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 CCDC113Q9H0I3 377 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 DPH5Q9H2P9 285 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 LRRC19Q9H756 370 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 APOBEC3GQ9HC16 384 aaKnown RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 BTBD7Q9P203 1132 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 CNOT8Q9UFF9 292 aaKnown RBP9.88□□□□□ -0.83
DDB1-211ENST00000538280 PCDHB2Q9Y5E7 798 aa9.88□□□□□ -0.83
DDB1-211ENST00000538280 ATXN2Q99700 1313 aaKnown RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 TMEM110-MUSTN1A8MSY1 372 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 ADCY3O60266 1144 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 FAM189A1O60320 539 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 MAFO75444 373 aaPredicted RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 LGR5O75473 907 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 CNMDO75829 334 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 GJB1P08034 283 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 PAEPP09466 180 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 CLTAP09496 248 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 RARAP10276 462 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 COPB2P35606 906 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 COILP38432 576 aaPredicted RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 ZNF132P52740 706 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 AP3M2P53677 418 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 EIF3BP55884 814 aaKnown RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 RWDD2BP57060 319 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 CUL2Q13617 745 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 CAPSQ13938 189 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 ARHGEF6Q15052 776 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 ZNF568Q3ZCX4 644 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 TREML2Q5T2D2 321 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 KCTD16Q68DU8 428 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 CDCA2Q69YH5 1023 aaPredicted RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 TRMT1LQ7Z2T5 733 aaKnown RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 PHF13Q86YI8 300 aaPredicted RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 BRSK2Q8IWQ3 736 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 ARFGAP2Q8N6H7 521 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 DEPTORQ8TB45 409 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 DIS3LQ8TF46 1054 aaKnown RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 TMEM143Q96AN5 459 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 TLCD1Q96CP7 247 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 VCPIP1Q96JH7 1222 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 FGD4Q96M96 766 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 FNBP1Q96RU3 617 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 PI4K2AQ9BTU6 479 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 TMEM109Q9BVC6 243 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 RNF208Q9H0X6 261 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 SLC12A6Q9UHW9 1150 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 RRP15Q9Y3B9 282 aaKnown RBP9.87□□□□□ -0.83
DDB1-211ENST00000538280 UNC80Q8N2C7 3258 aa9.87□□□□□ -0.83
DDB1-211ENST00000538280 UMODL1Q5DID0 1318 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 IGKV6-21A0A0C4DH24 114 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 A0A0G2JLL6 359 aaPredicted RBP9.86□□□□□ -0.83
DDB1-211ENST00000538280 TCRBV7S2A1N4TA0A589 114 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 K7ERI5 159 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 ABLIM1O14639 778 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 SPOPO43791 374 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 GAS2O43903 313 aaKnown RBP9.86□□□□□ -0.83
DDB1-211ENST00000538280 GNRH1P01148 92 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 MYZAPP0CAP1 466 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 TGFB3P10600 412 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 KRT5P13647 590 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 TBXAS1P24557 533 aaPredicted RBP9.86□□□□□ -0.83
DDB1-211ENST00000538280 LSP1P33241 339 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 MAN1A1P33908 653 aa9.86□□□□□ -0.83
DDB1-211ENST00000538280 MDH1P40925 334 aaKnown RBP9.86□□□□□ -0.83
DDB1-211ENST00000538280 PIK3CAP42336 1068 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms