RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 EPS8L1Q8TE68 723 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 TTC9Q92623 222 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 RSPRY1Q96DX4 576 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 SCLT1Q96NL6 688 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 SPSB2Q99619 263 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 COLEC11Q9BWP8 271 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 CAPN10Q9HC96 672 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 PILRBQ9UKJ0 227 aa10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 HEMK1Q9Y5R4 338 aaPredicted RBP10.71□□□□□ -0.69
PRKAB1-204ENST00000538271 MYH9P35579 1960 aaKnown RBP10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 DNHD1Q96M86 4753 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 CNTNAP2Q9UHC6 1331 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 PLK4O00444 970 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 ATG7O95352 703 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 SERPINF2P08697 491 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 MYF5P13349 255 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 JUNDP17535 347 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 CCR2P41597 374 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 SEMG2Q02383 582 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 DMC1Q14565 340 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 DUOXA1Q1HG43 343 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 MSS51Q4VC12 460 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 TMEM196Q5HYL7 178 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 EFCAB12Q6NXP0 572 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 CEP85Q6P2H3 762 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 RTL10Q7L3V2 364 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 LPCAT2Q7L5N7 544 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 SYT13Q7L8C5 426 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 CMTR1Q8N1G2 835 aaKnown RBP10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 TMEM57Q8N5G2 664 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 E2F7Q96AV8 911 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 NXPE2Q96DL1 559 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 PSMG3-AS1Q96PY0 264 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 GAD1Q99259 594 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 LRRCC1Q9C099 1032 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 SNTG2Q9NY99 539 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 PCOLCE2Q9UKZ9 415 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 PIN4Q9Y237 131 aaKnown RBP10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 PCDHB2Q9Y5E7 798 aa10.7□□□□□ -0.7
PRKAB1-204ENST00000538271 ZMYM6O95789 1325 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 CEP192Q8TEP8 1941 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 ZNF197O14709 1029 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 MAFGO15525 162 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 CT47B1P0C2W7 299 aaPredicted RBP10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 ATP4AP20648 1035 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 ITPKAP23677 461 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 HOXD12P35452 270 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 GRSF1Q12849 480 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 NR6A1Q15406 480 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 PSMD5Q16401 504 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 PREPLQ4J6C6 727 aaPredicted RBP10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 C2orf27AQ580R0 203 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 MRPL10Q7Z7H8 261 aaKnown RBP10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 STAG2Q8N3U4 1231 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 LRRC71Q8N4P6 559 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 CEP76Q8TAP6 659 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 ZFYVE19Q96K21 471 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 CORO1BQ9BR76 489 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 ADAM28Q9UKQ2 775 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 UBIAD1Q9Y5Z9 338 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 PCNX1Q96RV3 2341 aa10.69□□□□□ -0.7
PRKAB1-204ENST00000538271 BACH1O14867 736 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 MAGEB2O15479 319 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 ATXN1LP0C7T5 689 aaKnown RBP10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 TMOD1P28289 359 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 KCNH2Q12809 1159 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 TRAF1Q13077 416 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 RAB33AQ14088 237 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 SMAD1Q15797 465 aaKnown RBP10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 FAM160B1Q5W0V3 765 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 LYSMD4Q5XG99 296 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 PDZD4Q76G19 769 aaPredicted RBP10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 HOMER1Q86YM7 354 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 SPACA3Q8IXA5 215 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 ZKSCAN3Q9BRR0 538 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 MAN2B2Q9Y2E5 1009 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 CABIN1Q9Y6J0 2220 aa10.68□□□□□ -0.7
PRKAB1-204ENST00000538271 NFASCO94856 1347 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 BSNQ9UPA5 3926 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 LRBAP50851 2863 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 MOSPD3O75425 235 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 EGFP01133 1207 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 AFPP02771 609 aaKnown RBP10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 SFPQP23246 707 aaKnown RBP eCLIP10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 CCDC173Q0VFZ6 552 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 NFATC3Q12968 1075 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 PTPRNQ16849 979 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 ARHGAP40Q5TG30 622 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 USP17L6PQ6QN14 398 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 ATG14Q6ZNE5 492 aa10.67□□□□□ -0.7
PRKAB1-204ENST00000538271 RASSF3Q86WH2 238 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms