RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 RIC1Q4ADV7 1423 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 C15orf38-AP3S2A0A0A6YYH1 394 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 H3BSA7 217 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 DKC1O60832 514 aaKnown RBP eCLIP11.3□□□□□ -0.6
RTN3-208ENST00000537981 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 CETN2P41208 172 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 PPP1R2P41236 205 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 DRG2P55039 364 aaKnown RBP11.3□□□□□ -0.6
RTN3-208ENST00000537981 PDK3Q15120 406 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 SLC45A4Q5BKX6 768 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 THOC7Q6I9Y2 204 aaKnown RBP11.3□□□□□ -0.6
RTN3-208ENST00000537981 PPP1R2P3Q6NXS1 205 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 POTEAQ6S8J7 498 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 CAPN12Q6ZSI9 719 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 ARPINQ7Z6K5 226 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 FBXO33Q7Z6M2 555 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 LRRC43Q8N309 656 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 PPM1KQ8N3J5 372 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 DQX1Q8TE96 717 aaKnown RBP11.3□□□□□ -0.6
RTN3-208ENST00000537981 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 BLOC1S4Q9NUP1 217 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 NDE1Q9NXR1 346 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 DDX56Q9NY93 547 aaKnown RBP11.3□□□□□ -0.6
RTN3-208ENST00000537981 NINJ2Q9NZG7 142 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 TTC7AQ9ULT0 858 aaPredicted RBP11.3□□□□□ -0.6
RTN3-208ENST00000537981 TRAF3IP3Q9Y228 551 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 H3BRJ5 948 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 HAUS5O94927 633 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 TTLL1O95922 423 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 SCG2P13521 617 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 UCHL3P15374 230 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 VCLP18206 1134 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 GCAP28676 217 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 RCVRNP35243 200 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 ENTPD1P49961 510 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 Q6ZNX1 250 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 DENND1AQ8TEH3 1009 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 EDEM3Q9BZQ6 932 aa11.3□□□□□ -0.6
RTN3-208ENST00000537981 RPL26L1Q9UNX3 145 aaKnown RBP11.3□□□□□ -0.6
RTN3-208ENST00000537981 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
RTN3-208ENST00000537981 ABCB11O95342 1321 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 SMIM31A0A1B0GVY4 71 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 C2CD2LO14523 706 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 MAGEB2O15479 319 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 GAS8O95995 478 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
RTN3-208ENST00000537981 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 EPS15P42566 896 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 SERPINB8P50452 374 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 PPATQ06203 517 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 MED21Q13503 144 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 KIF22Q14807 665 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 EFTUD2Q15029 972 aaKnown RBP eCLIP11.29□□□□□ -0.63e-9■■■■□ 23.3
RTN3-208ENST00000537981 TGFBIQ15582 683 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 PKN2Q16513 984 aaKnown RBP11.29□□□□□ -0.6
RTN3-208ENST00000537981 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 C1orf54Q8WWF1 131 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 RSPH1Q8WYR4 309 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 SNX27Q96L92 541 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 PLVAPQ9BX97 442 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 BTG4Q9NY30 223 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 SLC7A8Q9UHI5 535 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 PCDH11YQ9BZA8 1340 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 MEI4A8MW99 385 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 CIAO1O76071 339 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 TTC4O95801 387 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 ALAS1P13196 640 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 IDO1P14902 403 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 SCNN1AP37088 669 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 PPIDQ08752 370 aaKnown RBP11.29□□□□□ -0.6
RTN3-208ENST00000537981 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 LPIN1Q14693 890 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
RTN3-208ENST00000537981 CYP4F22Q6NT55 531 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 ADGRA1Q86SQ6 560 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
RTN3-208ENST00000537981 LRRC6Q86X45 466 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 BLIDQ8IZY5 108 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 ATG4AQ8WYN0 398 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 GJA10Q969M2 543 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 THAP2Q9H0W7 228 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 USP21Q9UK80 565 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms