RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 DHX38Q92620 1227 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 B3GALT6Q96L58 329 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ADPGKQ9BRR6 497 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 NXF1Q9UBU9 619 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ABCA10Q8WWZ4 1543 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 FOXN1O15353 648 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 NFKBIAP25963 317 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ARL4AP40617 200 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RGS2P41220 211 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 NR1I3Q14994 352 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TBCCQ15814 346 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ACCSLQ4AC99 568 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TCAIMQ8N3R3 496 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CHID1Q9BWS9 393 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 KCNG1Q9UIX4 513 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 KIAA0232Q92628 1395 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SRP72O76094 671 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RAD23AP54725 363 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ZSCAN32Q9NX65 697 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 KLRF2D3W0D1 207 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SARSP49591 514 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RPS6KA3P51812 740 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ARPC4P59998 168 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 LRRC47Q8N1G4 583 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF579Q8NAF0 562 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PCYOX1LQ8NBM8 494 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SDR42E1Q8WUS8 393 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CHKBQ9Y259 395 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TELO2Q9Y4R8 837 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SH3TC1Q8TE82 1336 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PHGDHO43175 533 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PTPREP23469 700 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SLC34A1Q06495 639 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 POLA2Q14181 598 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 DRAP1Q14919 205 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PPP6R3Q5H9R7 873 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TAS2R42Q7RTR8 314 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ISCUQ9H1K1 167 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TTLL13PA6NNM8 815 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 KLK7P49862 253 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SNX13Q9Y5W8 968 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TOPBP1Q92547 1522 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PZPP20742 1482 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SPHKAPQ2M3C7 1700 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PIPSLA2A3N6 862 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MED7O43513 233 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PEX1O43933 1283 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MAGEA4P43358 317 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 GCLCP48506 637 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 FAM69CQ0P6D2 419 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 KCNH2Q12809 1159 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LPIN1Q14693 890 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CDO1Q16878 200 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 KCNB2Q92953 911 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CROCC2H7BZ55 1655 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 NEURL1BA8MQ27 555 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CHN2P52757 468 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TCHHL1Q5QJ38 904 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 FRA10AC1Q70Z53 315 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PDCD6IPQ8WUM4 868 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 NLRP3Q96P20 1036 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 C1orf50Q9BV19 199 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 EHD4Q9H223 541 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 DHX36Q9H2U1 1008 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 EML4Q9HC35 981 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 IARS2Q9NSE4 1012 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 EMILIN3Q9NT22 766 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PCDHA4Q9UN74 947 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 BTBD3Q9Y2F9 522 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LOC100506127A0A0U1RQW1 187 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SLC9A1P19634 815 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SOX5P35711 763 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 RGS21Q2M5E4 152 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 BRDTQ58F21 947 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LAYNQ6UX15 382 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ZBTB49Q6ZSB9 765 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 RTL3Q8N8U3 475 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PI4K2BQ8TCG2 481 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ATP8B4Q8TF62 1192 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 KLF6Q99612 283 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 EPB41L4AQ9HCS5 686 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PCSK1NQ9UHG2 260 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TMCO1Q9UM00 188 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 HMGXB3Q12766 1538 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 USP17L12C9JPN9 530 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 USP17L21D6R901 530 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 POLGP54098 1239 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 DDI2Q5TDH0 399 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 FBXO31Q5XUX0 539 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PPP4R4Q6NUP7 873 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LRRC6Q86X45 466 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SIRT2Q8IXJ6 389 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 FAM149B1Q96BN6 582 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 NDNQ99608 321 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MRPL39Q9NYK5 338 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MOSPD1Q9UJG1 213 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 O00370 1275 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CLDN3O15551 220 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms