RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 URI1O94763 535 aaPredicted RBP4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 MT-ND3P03897 115 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 APOA4P06727 396 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 THP07101 528 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SFTPCP11686 197 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 XBP1P17861 261 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 PEX2P28328 305 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 GRIA2P42262 883 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 LIFRP42702 1097 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 ADKP55263 362 aaKnown RBP4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 PRKG1Q13976 671 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 TNIP1Q15025 636 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 ANO4Q32M45 955 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SETMARQ53H47 684 aaPredicted RBP4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 EMC4Q5J8M3 183 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 RNF220Q5VTB9 566 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 CPZQ66K79 652 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 GALNT17Q6IS24 598 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 C16orf87Q6PH81 154 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 CNSTQ6PJW8 725 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 TEPPQ6URK8 271 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 LMBR1LQ6UX01 489 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 MFSD6Q6ZSS7 791 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 MAMDC2Q7Z304 686 aaPredicted RBP4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 LIMS2Q7Z4I7 341 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 GALNTL5Q7Z4T8 443 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 NLRP14Q86W24 1093 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 TTC9BQ8N6N2 239 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 TSPYL6Q8N831 410 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 NAT8LQ8N9F0 302 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SIMC1Q8NDZ2 872 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SSH1Q8WYL5 1049 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 RFFLQ8WZ73 363 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 PHKBQ93100 1093 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SPATA17Q96L03 361 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SDF4Q9BRK5 362 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 GTPBP4Q9BZE4 634 aaKnown RBP4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 BTBD1Q9H0C5 482 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 C2orf40Q9H1Z8 148 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SPON1Q9HCB6 807 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 TRMT1Q9NXH9 659 aaKnown RBP4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 POGKQ9P215 609 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 DKK3Q9UBP4 350 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 AASSQ9UDR5 926 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 FAM184BQ9ULE4 1060 aa4.88□□□□□ -1.63
AC055720.2-201ENST00000537724 SYNJ2BP-COX16A0A087WUM0 186 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 C9orf118A6NHY6 69 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 IPO8O15397 1037 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 XPOTO43592 962 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 TSPAN3O60637 253 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 DGKIO75912 1065 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 SGPL1O95470 568 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 HSPA4LO95757 839 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 LRG1P02750 347 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 CYP1A1P04798 512 aaPredicted RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 POLBP06746 335 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ATP1A3P13637 1013 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ZNF20P17024 532 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 TNFRSF1AP19438 455 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 MC4RP32245 332 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 IL13P35225 146 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 TNNT3P45378 269 aaPredicted RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 LIMK1P53667 647 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 MLLT6P55198 1093 aaPredicted RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 TLE2Q04725 743 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 COX10Q12887 443 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 KRTCAP3Q53RY4 240 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 FAM209BQ5JX69 171 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 FBXO47Q5MNV8 452 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 SLC35F1Q5T1Q4 408 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 IRGCQ6NXR0 463 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 RPUSD3Q6P087 351 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 APOA5Q6Q788 366 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 GLB1LQ6UWU2 654 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 DDX53Q86TM3 631 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 LRRTM4Q86VH4 590 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 TRMT2AQ8IZ69 625 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 NXPE1Q8N323 547 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ZNF527Q8NB42 609 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ANKRD52Q8NB46 1076 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ZNF606Q8WXB4 792 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 LTV1Q96GA3 475 aaPredicted RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 TIGD1Q96MW7 591 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 C7orf26Q96N11 449 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 JAKMIP1Q96N16 626 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 CLIC6Q96NY7 704 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 SLF1Q9BQI6 1058 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 GPATCH1Q9BRR8 931 aaKnown RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ARHGAP39Q9C0H5 1083 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 GHITMQ9H3K2 345 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 EPB41L1Q9H4G0 881 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 L2HGDHQ9H9P8 463 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 SAMD15Q9P1V8 674 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 MYOTQ9UBF9 498 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 CTNNA3Q9UI47 895 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ST6GALNAC2Q9UJ37 374 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 CROTQ9UKG9 612 aa4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 ZHX1Q9UKY1 873 aaPredicted RBP4.87□□□□□ -1.63
AC055720.2-201ENST00000537724 WASF3Q9UPY6 502 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms