RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PDCD11Q14690 1871 aaKnown RBP21.47■■□□□ 1.03
TNFRSF1B-204ENST00000536782 PATJQ8NI35 1801 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 NPHP3-ACAD11A0A0J9YXS1 232 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 GLULP15104 373 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 CACNB1Q02641 598 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 KCNG4Q8TDN1 519 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 DDX12PQ92771 950 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 BICD1Q96G01 975 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 AK8Q96MA6 479 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 CORO1BQ9BR76 489 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 PLEKHA5Q9HAU0 1116 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 TUBGCP4Q9UGJ1 667 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 INSL5Q9Y5Q6 135 aa21.46■■□□□ 1.03
TNFRSF1B-204ENST00000536782 MYH11P35749 1972 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SLC26A4O43511 780 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LRRN2O75325 713 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SEC24AO95486 1093 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CLTAP09496 248 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CXCL8P10145 99 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CEBPBP17676 345 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MARCKSP29966 332 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 NCKAP1LP55160 1127 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ARSHQ5FYA8 562 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ZC3H14Q6PJT7 736 aaKnown RBP21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 HAUS6Q7Z4H7 955 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ELMOD1Q8N336 334 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 BCO2Q9BYV7 579 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ODF2LQ9ULJ1 636 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MAFFQ9ULX9 164 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 PCDHB8Q9UN66 801 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 R4GN57 208 aa21.45■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ZNF197O14709 1029 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LMNAP02545 664 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SP9P0CG40 484 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 UBXN2BQ14CS0 331 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 PRSS36Q5K4E3 855 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 PDZD4Q76G19 769 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 KCNN1Q92952 543 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CALML4Q96GE6 196 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 OSBPL6Q9BZF3 934 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 HAPLN2Q9GZV7 340 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 AFF4Q9UHB7 1163 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SMC3Q9UQE7 1217 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 F5P12259 2224 aa21.44■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TTC26A0AVF1 554 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MICAL2O94851 1124 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CD2BP2O95400 341 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CPB1P15086 417 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SCP2P22307 547 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 UBA7P41226 1012 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LIG4P49917 911 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 PPP2R3AQ06190 1150 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SPAG1Q07617 926 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ADCY1Q08828 1119 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 KYAT1Q16773 422 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CYP4A22Q5TCH4 519 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TANGO2Q6ICL3 276 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 IQCEQ6IPM2 695 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 POTEHQ6S545 545 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ELSPBP1Q96BH3 223 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 KIF12Q96FN5 646 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ZNF512Q96ME7 567 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 REEP2Q9BRK0 252 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 PLA2G2FQ9BZM2 168 aa21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 UBQLN1Q9UMX0 589 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1B-204ENST00000536782 DNAH14Q0VDD8 3507 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 FAM170BA6NMN3 283 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 M0QZQ0 153 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 HNRNPDLO14979 420 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CYP3A5P20815 502 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LRPAP1P30533 357 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TNFSF9P41273 254 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MCM2P49736 904 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 YWHAHQ04917 246 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 GPBP1Q86WP2 473 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MYCT1Q8N699 235 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TCEAL4Q96EI5 215 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 OXCT2Q9BYC2 517 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LTB4R2Q9NPC1 389 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TBX20Q9UMR3 447 aa21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MTF2Q9Y483 593 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF1B-204ENST00000536782 XPOTO43592 962 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 FAM13AO94988 1023 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 OAZ2O95190 189 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CD72P21854 359 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MAGEA9P43362 315 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TWF1Q12792 350 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 DHX8Q14562 1220 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ZBTB6Q15916 424 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ZBTB41Q5SVQ8 909 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LARP1BQ659C4 914 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 RNF19BQ6ZMZ0 732 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TPRG1Q6ZUI0 275 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TMEM130Q8N3G9 435 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 NELL2Q99435 816 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 ZFP14Q9HCL3 533 aa21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 SPATA6Q9NWH7 488 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CEP72Q9P209 647 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms