RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PLA2G6O60733 806 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 PHF2O75151 1096 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 RASSF9O75901 435 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 FGGP02679 453 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 VIL1P09327 827 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 VCAM1P19320 739 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 DRD4P21917 467 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CTNNA2P26232 953 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 DNAJA1P31689 397 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF76P36508 570 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 GTF2A1P52655 376 aaPredicted RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 SNAP25P60880 206 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 SNRPFP62306 86 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 JAG1P78504 1218 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 MYL7Q01449 175 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CYP4A11Q02928 519 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 BFSP1Q12934 665 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ORC1Q13415 861 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 BYSLQ13895 437 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 DOC2BQ14184 412 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CTTNQ14247 550 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 EPC2Q52LR7 807 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ZC2HC1CQ53FD0 456 aaPredicted RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 TNFAIP8L3Q5GJ75 292 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 FAM182BQ5T319 152 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ERMARDQ5T6L9 678 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 LRCH2Q5VUJ6 765 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 SDE2Q6IQ49 451 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 FAM43BQ6ZT52 329 aaPredicted RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 HS2ST1Q7LGA3 356 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF438Q7Z4V0 828 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CROCCP2Q86T23 111 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 HOOK3Q86VS8 718 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 NLRP8Q86W28 1048 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 COL23A1Q86Y22 540 aaPredicted RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 JAMLQ86YT9 394 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 EGFL6Q8IUX8 553 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 DAW1Q8N136 415 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 MYCT1Q8N699 235 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 OR2W6PQ8NHA6 318 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CYP2W1Q8TAV3 490 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 MICAL1Q8TDZ2 1067 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 UBLCP1Q8WVY7 318 aaPredicted RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CTNNBL1Q8WYA6 563 aaPredicted RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 RAPGEF5Q92565 580 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ALG3Q92685 438 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 PGM2Q96G03 612 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 RUNDC3BQ96NL0 473 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 FMO2Q99518 471 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 AGPAT1Q99943 283 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ERP44Q9BS26 406 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 TRIM51Q9BSJ1 452 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CELF4Q9BZC1 486 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 WDR11Q9BZH6 1224 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 ST6GALNAC4Q9H4F1 302 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 PRDM16Q9HAZ2 1276 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 OSGEPQ9NPF4 335 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 GRHL1Q9NZI5 618 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 NOP53Q9NZM5 478 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 PCYOX1Q9UHG3 505 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 DDX20Q9UHI6 824 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 CNOT7Q9UIV1 285 aaKnown RBP6.16□□□□□ -1.42
VPS33A-203ENST00000536212 PHF24Q9UPV7 400 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 FRMD4BQ9Y2L6 1034 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 NR2E1Q9Y466 385 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 PCDHA3Q9Y5H8 950 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 MYH10P35580 1976 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 GOLGA6L10A0A0M3HER8 536 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 A0A1W2PRG0 241 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 E7EVH7 732 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 FOXN3O00409 490 aaPredicted RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PODXLO00592 558 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 EIF1AYO14602 144 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 SORBS3O60504 671 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 LYPLA2O95372 231 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 THBS1P07996 1170 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 POLR2MP0CAP2 368 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 GZMAP12544 262 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 HOXA13P31271 388 aaPredicted RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 CHRNA3P32297 505 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 PEX5P50542 639 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 MAGOHP61326 146 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 GPC5P78333 572 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 DR1Q01658 176 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 GHRHRQ02643 423 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 TCP10Q12799 353 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 RRP1BQ14684 758 aaKnown RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 COG2Q14746 738 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 SETDB1Q15047 1291 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 TRIP4Q15650 581 aaPredicted RBP6.15□□□□□ -1.42
VPS33A-203ENST00000536212 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 KRT71Q3SY84 523 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF568Q3ZCX4 644 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 USH1GQ495M9 461 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 EFHC2Q5JST6 749 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 KIAA1755Q5JYT7 1200 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 C1orf220Q5T0J3 134 aa6.15□□□□□ -1.42
VPS33A-203ENST00000536212 FBXW10Q5XX13 1052 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms