RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 GADD45BO75293 160 aaPredicted RBP24.06■■□□□ 1.44
VPS37C-202ENST00000535818 GLUD1P00367 558 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 HOXB8P17481 243 aaPredicted RBP24.06■■□□□ 1.44
VPS37C-202ENST00000535818 KCNB1Q14721 858 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 ELMSAN1Q6PJG2 1045 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 NT5DC4Q86YG4 428 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 EFCAB13Q8IY85 973 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 SMRP1Q8NCR6 262 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 GOLGA5Q8TBA6 731 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 LNX1Q8TBB1 728 aaPredicted RBP24.06■■□□□ 1.44
VPS37C-202ENST00000535818 TIGD1Q96MW7 591 aa24.06■■□□□ 1.44
VPS37C-202ENST00000535818 TFAMQ00059 246 aaKnown RBP24.05■■□□□ 1.44
VPS37C-202ENST00000535818 ANKS3Q6ZW76 656 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 PALB2Q86YC2 1186 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 CBWD2Q8IUF1 395 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 XXYLT1Q8NBI6 393 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 SUSD3Q96L08 255 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 FBXL18Q96ME1 805 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 UHRF1Q96T88 793 aaPredicted RBP24.05■■□□□ 1.44
VPS37C-202ENST00000535818 COL25A1Q9BXS0 654 aaPredicted RBP24.05■■□□□ 1.44
VPS37C-202ENST00000535818 RMND1Q9NWS8 449 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 DPP3Q9NY33 737 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 VWA8A3KMH1 1905 aa24.05■■□□□ 1.44
VPS37C-202ENST00000535818 SYN3O14994 580 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 SMC2O95347 1197 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 C9orf57Q5W0N0 161 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 SYCE2Q6PIF2 218 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 DSTYKQ6XUX3 929 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 RDH13Q8NBN7 331 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 CACTINQ8WUQ7 758 aaKnown RBP24.04■■□□□ 1.44
VPS37C-202ENST00000535818 PDE11AQ9HCR9 933 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 MAN1C1Q9NR34 630 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 DPP7Q9UHL4 492 aa24.04■■□□□ 1.44
VPS37C-202ENST00000535818 PPEF2O14830 753 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 TMEM191BP0C7N4 346 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 WNT7BP56706 349 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 SURF1Q15526 300 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 SNRNP35Q16560 246 aaKnown RBP24.03■■□□□ 1.44
VPS37C-202ENST00000535818 RARS2Q5T160 578 aaKnown RBP24.03■■□□□ 1.44
VPS37C-202ENST00000535818 CES5AQ6NT32 575 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 C12orf56Q8IXR9 622 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 APPL2Q8NEU8 664 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 MTRRQ9UBK8 725 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 PCDHB8Q9UN66 801 aa24.03■■□□□ 1.44
VPS37C-202ENST00000535818 USP15Q9Y4E8 981 aaPredicted RBP24.03■■□□□ 1.44
VPS37C-202ENST00000535818 PLXNA3P51805 1871 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 H7C4K7 107 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 EXOC3O60645 756 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 SMAD2Q15796 467 aaKnown RBP24.02■■□□□ 1.44
VPS37C-202ENST00000535818 VARS2Q5ST30 1063 aaKnown RBP24.02■■□□□ 1.44
VPS37C-202ENST00000535818 C12orf76Q8N812 135 aaPredicted RBP24.02■■□□□ 1.44
VPS37C-202ENST00000535818 SMARCE1Q969G3 411 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 CLSTN3Q9BQT9 956 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 SFXN1Q9H9B4 322 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 MAPK8IP1Q9UQF2 711 aa24.02■■□□□ 1.44
VPS37C-202ENST00000535818 XIRP2A4UGR9 3374 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 PDXKO00764 312 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 TGM5O43548 720 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 CALUO43852 315 aaPredicted RBP24.01■■□□□ 1.43
VPS37C-202ENST00000535818 PAX3P23760 479 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 UBE2HP62256 183 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 ITIH3Q06033 890 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 ANKRD36BP1Q96IX9 119 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 NECAB3Q96P71 396 aaPredicted RBP24.01■■□□□ 1.43
VPS37C-202ENST00000535818 GSDMAQ96QA5 445 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 S1PR5Q9H228 398 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 KCTD10Q9H3F6 313 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 BACE2Q9Y5Z0 518 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 CDY1Q9Y6F8 540 aa24.01■■□□□ 1.43
VPS37C-202ENST00000535818 SPTBN5Q9NRC6 3674 aaKnown RBP24■■□□□ 1.43
VPS37C-202ENST00000535818 ANO9A1A5B4 782 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 DLL1O00548 723 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 PIRO00625 290 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 SPATA31D3P0C874 917 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 OR1D2P34982 312 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 AARSP49588 968 aaKnown RBP eCLIP24■■□□□ 1.43
VPS37C-202ENST00000535818 TAF6P49848 677 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 LILRA4P59901 499 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 LMBRD2Q68DH5 695 aaPredicted RBP24■■□□□ 1.43
VPS37C-202ENST00000535818 ZNF280DQ6N043 979 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 SPATA31D4Q6ZUB0 917 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 USP37Q86T82 979 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 GUF1Q8N442 669 aaKnown RBP24■■□□□ 1.43
VPS37C-202ENST00000535818 ERCC4Q92889 916 aaPredicted RBP24■■□□□ 1.43
VPS37C-202ENST00000535818 ZNF560Q96MR9 790 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 FNBP1Q96RU3 617 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 MTMR12Q9C0I1 747 aa24■■□□□ 1.43
VPS37C-202ENST00000535818 R3HCC1Q9Y3T6 440 aaKnown RBP24■■□□□ 1.43
VPS37C-202ENST00000535818 ARHGEF37A1IGU5 675 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 M0QZQ0 153 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 PRPF40AO75400 957 aaKnown RBP23.99■■□□□ 1.43
VPS37C-202ENST00000535818 C1RP00736 705 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 TNNC2P02585 160 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 ITGB3P05106 788 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 KRT19P08727 400 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 DLATP10515 647 aaKnown RBP23.99■■□□□ 1.43
VPS37C-202ENST00000535818 ODC1P11926 461 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 POLR2BP30876 1174 aaKnown RBP23.99■■□□□ 1.43
VPS37C-202ENST00000535818 CYP24A1Q07973 514 aa23.99■■□□□ 1.43
VPS37C-202ENST00000535818 CTXN3Q4LDR2 81 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms