RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 OLFML3Q9NRN5 406 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 PRR12Q9ULL5 1215 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 FMO5P49326 533 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 TWF1Q12792 350 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 PCSK7Q16549 785 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 SNX31Q8N9S9 440 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 VCPKMTQ9H867 229 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 RAB6BQ9NRW1 208 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 FAM32AQ9Y421 112 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 LRRC74AQ0VAA2 488 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 INPP5AQ14642 412 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 RARS2Q5T160 578 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 SLC35G2Q8TBE7 412 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 ZC3H7BQ9UGR2 993 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 FBXO2Q9UK22 296 aaPredicted RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 ZBTB12Q9Y330 459 aaPredicted RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 MAN1A2O60476 641 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 R3HDM1Q15032 1099 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 SLC7A14Q8TBB6 771 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 HPS3Q969F9 1004 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 TSC22D3Q99576 134 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 PCDHB7Q9Y5E2 793 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 SLC26A4O43511 780 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 ALDH1A3P47895 512 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 HHIPL2Q6UWX4 724 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 CFAP99D6REC4 459 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 HSPA1AP0DMV8 641 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 HSPA1BP0DMV9 641 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 ALDH18A1P54886 795 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 DMC1Q14565 340 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 DGKDQ16760 1214 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 SBK1Q52WX2 424 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 C6orf10Q5SRN2 563 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 PRR5LQ6MZQ0 368 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 ARMC6Q6NXE6 501 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 EFCAB12Q6NXP0 572 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 KCNV2Q8TDN2 545 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 SPATA16Q9BXB7 569 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 MOV10L1Q9BXT6 1211 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 FAM49BQ9NUQ9 324 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 ADAM21Q9UKJ8 722 aa19.06■□□□□ 0.64
SFSWAP-203ENST00000535236 GOLGA8RI6L899 631 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 TRIM28Q13263 835 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 TJAP1Q5JTD0 557 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 PTRHD1Q6GMV3 140 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 KIRREL3Q8IZU9 778 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 CNPY4Q8N129 248 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 FAM151AQ8WW52 585 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 TMEM117Q9H0C3 514 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 CD274Q9NZQ7 290 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 XPO7Q9UIA9 1087 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 HARS2P49590 506 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 ARHGAP15Q53QZ3 475 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 ERAP1Q9NZ08 941 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 PJA2O43164 708 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 PLA2G4FQ68DD2 849 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 NBPF10Q6P3W6 841 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 PHF20Q9BVI0 1012 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 PRMT7Q9NVM4 692 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 PSD3Q9NYI0 1048 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 ZNF263O14978 683 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 CPT1AP50416 773 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 MTFR1Q15390 333 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 SLC25A41Q8N5S1 370 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 SHCBP1Q8NEM2 672 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 NUDT12Q9BQG2 462 aa19.05■□□□□ 0.64
SFSWAP-203ENST00000535236 RGS4P49798 205 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 HIC1Q14526 733 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 CHST13Q8NET6 341 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 SERPINB4P48594 390 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 SERPINB9P50453 376 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 NBPF26B4DH59 902 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 SUPT3HB4E1H0 165 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 PHF2O75151 1096 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 HUNKP57058 714 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 SREBF2Q12772 1141 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 LRRC23Q53EV4 343 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 NBPF15Q8N660 670 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 TMCO5AQ8N6Q1 288 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 CALML6Q8TD86 181 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 C7orf25Q9BPX7 421 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 TRAF3IP3Q9Y228 551 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 KRT87PA6NCN2 255 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 PSMD14O00487 310 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 HBP1O60381 514 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 GRAP2O75791 330 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 CCDC15Q0P6D6 951 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 PHF21AQ96BD5 680 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 TASP1Q9H6P5 420 aa19.04■□□□□ 0.64
SFSWAP-203ENST00000535236 PDHA1P08559 390 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 SLC18A3Q16572 532 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 NUP93Q8N1F7 819 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 NSMCE4AQ9NXX6 385 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 RRN3P2A6NIE6 340 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 MYBP10242 640 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 PDK1Q15118 436 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 RFX8Q6ZV50 586 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 ATG9AQ7Z3C6 839 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms