RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	ACAD9	Q9H845	621 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	IL1RAPL2	Q9NP60	686 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	GPRC5C	Q9NQ84	441 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	PAG1	Q9NWQ8	432 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	ACTR10	Q9NZ32	417 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	FEM1B	Q9UK73	627 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	ZNF536	O15090	1300 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	PLIN4	Q96Q06	1357 aa		7.17	□□□□□ -1.26
PICALM-223	ENST00000534412	FFAR3	O14843	346 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	BAIAP3	O94812	1187 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	CHGB	P05060	677 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	ACTN1	P12814	892 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	PTGS1	P23219	599 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	PML	P29590	882 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	PSMC6	P62333	389 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	PURA	Q00577	322 aa	Known RBP	7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	SBK1	Q52WX2	424 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	LARP1B	Q659C4	914 aa	Known RBP	7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	IQSEC1	Q6DN90	963 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	GTF2IRD2B	Q6EKJ0	949 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	IQCE	Q6IPM2	695 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	GIMAP6	Q6P9H5	292 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	GTF2IRD2	Q86UP8	949 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	TRIM59	Q8IWR1	403 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	CLASRP	Q8N2M8	674 aa	Known RBP	7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	SYT8	Q8NBV8	401 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	FNIP1	Q8TF40	1166 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	ARNTL2	Q8WYA1	636 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	COPS5	Q92905	334 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	KIF1BP	Q96EK5	621 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	MTA3	Q9BTC8	594 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	7.16	□□□□□ -1.26	4e-10	■■■□□ 14.7
PICALM-223	ENST00000534412	AP5M1	Q9H0R1	490 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	CERS4	Q9HA82	394 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	VTA1	Q9NP79	307 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	CYP26B1	Q9NR63	512 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	TRMT13	Q9NUP7	481 aa	Known RBP	7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	PLA2G2D	Q9UNK4	145 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	MRVI1	Q9Y6F6	885 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	SLC4A4	Q9Y6R1	1079 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	TNKS	O95271	1327 aa		7.16	□□□□□ -1.26
PICALM-223	ENST00000534412	MYH8	P13535	1937 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	SMAD7	O15105	426 aa	Known RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	CYP2C9	P11712	490 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	ATP5J	P18859	108 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	BUD31	P41223	144 aa	Predicted RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	MC3R	P41968	323 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	TKFC	Q3LXA3	575 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	SV2C	Q496J9	727 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	DUSP28	Q4G0W2	176 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	TMEM63B	Q5T3F8	832 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	NOL8	Q76FK4	1167 aa	Known RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	B3GNT8	Q7Z7M8	397 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	DCP2	Q8IU60	420 aa	Known RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	ITPRIP	Q8IWB1	547 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	FBXO16	Q8IX29	292 aa	Predicted RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	FTSJ3	Q8IY81	847 aa	Known RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	CXorf38	Q8TB03	319 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	CEP95	Q96GE4	821 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	PUS7L	Q9H0K6	701 aa	Known RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	KCNH6	Q9H252	994 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	BCAS3	Q9H6U6	928 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	PDGFC	Q9NRA1	345 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	HOMER2	Q9NSB8	354 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	RNF146	Q9NTX7	359 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	MTMR4	Q9NYA4	1195 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	CYP39A1	Q9NYL5	469 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	MARCH2	Q9P0N8	246 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	CLIP2	Q9UDT6	1046 aa		7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.15	□□□□□ -1.26
PICALM-223	ENST00000534412	COL4A4	P53420	1690 aa	Predicted RBP	7.15	□□□□□ -1.27
PICALM-223	ENST00000534412	TCF20	Q9UGU0	1960 aa	Known RBP	7.15	□□□□□ -1.27
PICALM-223	ENST00000534412	MYO9B	Q13459	2157 aa		7.15	□□□□□ -1.27
PICALM-223	ENST00000534412	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	LOC102724159	A0A0B4J2E5	919 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	GSG1L2	A8MUP6	293 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	KIF28P	B7ZC32	967 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	PLA2G6	O60733	806 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	PPP1R11	O60927	126 aa	Predicted RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	TTLL1	O95922	423 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	NTRK1	P04629	796 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	THBD	P07204	575 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	IFIT2	P09913	472 aa	Known RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	IQCF3	P0C7M6	154 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	CPT1A	P50416	773 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	STAT2	P52630	851 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	SLURP1	P55000	103 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	PWP2	Q15269	919 aa	Known RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	LEXM	Q3ZCV2	418 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	NFRKB	Q6P4R8	1299 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	FRMD5	Q7Z6J6	570 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	DEFB128	Q7Z7B8	93 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	FAM178B	Q8IXR5	827 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	LRRC47	Q8N1G4	583 aa	Known RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	CPA5	Q8WXQ8	436 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	STRBP	Q96SI9	672 aa	Known RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	TANC1	Q9C0D5	1861 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	UBE2Z	Q9H832	354 aa	Predicted RBP	7.14	□□□□□ -1.27

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