RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MAP1BP46821 2468 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 PTPRCP08575 1304 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ZNF532Q9HCE3 1301 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 SPEGQ15772 3267 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 TCRBV5S4A2TA0A5A2 114 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ASB14A6NK59 587 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ATP2A1O14983 1001 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 PRDM1O75626 825 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 EYA4O95677 639 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 AMHP03971 560 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CYBBP04839 570 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ASGR2P07307 311 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 DBHP09172 617 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 WEE2P0C1S8 567 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 MSL3P1P0C860 447 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ALAS1P13196 640 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 NCAM1P13591 858 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 NME1P15531 152 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 PDE6AP16499 860 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 TACR1P25103 407 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CNR2P34972 360 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CTNNB1P35222 781 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 COPB2P35606 906 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 BMPR1AP36894 532 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CTSKP43235 329 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 NRIP1P48552 1158 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 NDUFV1P49821 464 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ZNF165P49910 485 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ATXN1P54253 815 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CLCQ05315 142 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 BAATQ14032 418 aaPredicted RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 PTPN21Q16825 1174 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 LRRFIP1Q32MZ4 808 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ZFYVE27Q5T4F4 411 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 SLC9C2Q5TAH2 1124 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 C12orf60Q5U649 245 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 NFRKBQ6P4R8 1299 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 LRRC47Q8N1G4 583 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 KREMEN2Q8NCW0 462 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 TMEM52Q8NDY8 209 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CHST13Q8NET6 341 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 VN1R2Q8NFZ6 395 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 AFAP1L1Q8TED9 768 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 FNIP1Q8TF40 1166 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 AFG1LQ8WV93 481 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ALG3Q92685 438 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 TOP1MTQ969P6 601 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 YME1L1Q96TA2 773 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 SEZ6LQ9BYH1 1024 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CRNKL1Q9BZJ0 848 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 CYP39A1Q9NYL5 469 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 ISY1Q9ULR0 285 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 Q9Y3F1 56 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 HCFC2Q9Y5Z7 792 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 R4GN57 208 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 GBF1Q92538 1859 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 UNC79Q9P2D8 2635 aa3.53□□□□□ -1.84
CHMP4A-208ENST00000534106 RSPH10B2B2RC85 870 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 NCK2O43639 380 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SURF6O75683 361 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 MBD4O95243 580 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 GLP2RO95838 553 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 PLA2G1BP04054 148 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 ITGB1P05556 798 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 RSPH10BP0C881 870 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 TXNP10599 105 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 MCCP23508 829 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 IGFBP6P24592 240 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CALML3P27482 149 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 ICAM3P32942 547 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SLC16A2P36021 539 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 THPOP40225 353 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CPT1AP50416 773 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 GATMP50440 423 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 PRR5P85299 388 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 APOBRQ0VD83 1088 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 COASYQ13057 564 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 OS9Q13438 667 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 LY6KQ17RY6 165 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SLFN13Q68D06 897 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CTR9Q6PD62 1173 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 LIPIQ6XZB0 460 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 C16orf86Q6ZW13 317 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 KCTD1Q719H9 257 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CABP7Q86V35 215 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SMRP1Q8NCR6 262 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 SPPL3Q8TCT6 385 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 MORC4Q8TE76 937 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 RIN2Q8WYP3 895 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 TBC1D5Q92609 795 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 NKD1Q969G9 470 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 IL17RAQ96F46 866 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CHAMP1Q96JM3 812 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 DHRS1Q96LJ7 313 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 CCDC17Q96LX7 622 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 PHF7Q9BWX1 381 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 LRRC3Q9BY71 257 aa3.52□□□□□ -1.85
CHMP4A-208ENST00000534106 S1PR5Q9H228 398 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms