RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 LRG1P02750 347 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 PTPN2P17706 415 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 SDSP20132 328 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 GBP1P32455 592 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 MAPK8P45983 427 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 GNAQP50148 359 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 ADCY7P51828 1080 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 PDE1AP54750 535 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 WNT7BP56706 349 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 IRX4P78413 519 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 SETQ01105 290 aaPredicted RBP7.2□□□□□ -1.26
CD44-237ENST00000534082 GRIK3Q13003 919 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 AP3B2Q13367 1082 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 ZNF423Q2M1K9 1284 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 LINC01559Q495D7 138 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 PDXDC1Q6P996 788 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 CWC27Q6UX04 472 aaKnown RBP7.2□□□□□ -1.26
CD44-237ENST00000534082 PDZD4Q76G19 769 aaPredicted RBP7.2□□□□□ -1.26
CD44-237ENST00000534082 CYP2U1Q7Z449 544 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 PIP4P1Q86T03 277 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 MFSD6LQ8IWD5 586 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 TTC8Q8TAM2 541 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 ZSCAN18Q8TBC5 510 aaPredicted RBP7.2□□□□□ -1.26
CD44-237ENST00000534082 RILPL2Q969X0 211 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 HHIPQ96QV1 700 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 SH2D3AQ9BRG2 576 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 NXF3Q9H4D5 531 aaKnown RBP7.2□□□□□ -1.26
CD44-237ENST00000534082 MINDY3Q9H8M7 445 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 TRPV4Q9HBA0 871 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 RIC8AQ9NPQ8 531 aa7.2□□□□□ -1.26
CD44-237ENST00000534082 USP9XQ93008 2570 aaPredicted RBP7.2□□□□□ -1.26
CD44-237ENST00000534082 TDRD15B5MCY1 1934 aaKnown RBP7.19□□□□□ -1.26
CD44-237ENST00000534082 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 ARHGEF37A1IGU5 675 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 CASTOR2A6NHX0 329 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 J3QKU1 62 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 ATXN7O15265 892 aaPredicted RBP7.19□□□□□ -1.26
CD44-237ENST00000534082 MEFVO15553 781 aaPredicted RBP7.19□□□□□ -1.26
CD44-237ENST00000534082 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 AVPP01185 164 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 RXRAP19793 462 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 NAPAP54920 295 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 FAM193AP78312 1265 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 FCHO2Q0JRZ9 810 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 LMAN2Q12907 356 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 SEMA3BQ13214 749 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 C20orf194Q5TEA3 1177 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 PMS2CLQ68D20 193 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 RALYLQ86SE5 291 aaKnown RBP7.19□□□□□ -1.26
CD44-237ENST00000534082 TEX2Q8IWB9 1127 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 ZNF843Q8N446 348 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 CAMKK1Q8N5S9 505 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 GSTCDQ8NEC7 633 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 RSPRY1Q96DX4 576 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 CCDC51Q96ER9 411 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 CEP89Q96ST8 783 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 DISC1Q9NRI5 854 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 DIAPH3Q9NSV4 1193 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 POLR3BQ9NW08 1133 aaPredicted RBP7.19□□□□□ -1.26
CD44-237ENST00000534082 MTRRQ9UBK8 725 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 GIT1Q9Y2X7 761 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 COL4A3BPQ9Y5P4 624 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 CDY1Q9Y6F8 540 aa7.19□□□□□ -1.26
CD44-237ENST00000534082 PTPN13Q12923 2485 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 UPK3BL1B0FP48 263 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 UPK3BL2E5RIL1 263 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 PRRG1O14668 218 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 CHMP2AO43633 222 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 TSPAN1O60635 241 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 ATG13O75143 517 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 MOSPD3O75425 235 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 ERLIN2O94905 339 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 GJA1P17302 382 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 AKAP5P24588 427 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 ANTXR2P58335 489 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 ELAVL2Q12926 359 aaKnown RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 PTPRNQ16849 979 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 TRIM61Q5EBN2 209 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 XKR3Q5GH77 459 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 CYP4A22Q5TCH4 519 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 NOTUMQ6P988 496 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 CCNI2Q6ZMN8 369 aaPredicted RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 SRGAP1Q7Z6B7 1085 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 HACE1Q8IYU2 909 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 CCDC82Q8N4S0 544 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 CRYGNQ8WXF5 182 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 TSC1Q92574 1164 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 E2F7Q96AV8 911 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 NIFKQ9BYG3 293 aaKnown RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 TRIM6Q9C030 488 aaPredicted RBP7.18□□□□□ -1.26
CD44-237ENST00000534082 SLITRK6Q9H5Y7 841 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 SNTG2Q9NY99 539 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 GTSE1Q9NYZ3 720 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 KLK14Q9P0G3 267 aa7.18□□□□□ -1.26
CD44-237ENST00000534082 GMPR2Q9P2T1 348 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms