RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 PF4V1P10720 104 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 ATP5JP18859 108 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 EDNRBP24530 442 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 DDX6P26196 483 aaKnown RBP eCLIP4.49□□□□□ -1.69
RDX-215ENST00000533961 ZGPATQ8N5A5 531 aaKnown RBP4.49□□□□□ -1.69
RDX-215ENST00000533961 NLGN4YQ8NFZ3 816 aaPredicted RBP4.49□□□□□ -1.69
RDX-215ENST00000533961 CCHCR1Q8TD31 782 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 CHMP4CQ96CF2 233 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 BOD1Q96IK1 185 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 SPATA5L1Q9BVQ7 753 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 RHOBTB2Q9BYZ6 727 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 RNPEPQ9H4A4 650 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 SERHL2Q9H4I8 314 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 TMEM74BQ9NUR3 256 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 ZIM2Q9NZV7 527 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 FRMD4BQ9Y2L6 1034 aa4.49□□□□□ -1.69
RDX-215ENST00000533961 CENPVL1A0A0U1RR11 272 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 NCR1O76036 304 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 SCGB1D2O95969 90 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 FOSP01100 380 aaPredicted RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 RPLP2P05387 115 aaKnown RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 GCSHP23434 173 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 RNASE9P60153 205 aaKnown RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 PRR16Q569H4 304 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 SP5Q6BEB4 398 aaPredicted RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 COL23A1Q86Y22 540 aaPredicted RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 SYT12Q8IV01 421 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 CMTR2Q8IYT2 770 aaKnown RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 LCORLQ8N3X6 602 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 C9orf106Q8NAJ2 232 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 RNF169Q8NCN4 708 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 SLC35B2Q8TB61 432 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 JPH3Q8WXH2 748 aaPredicted RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 PUS7Q96PZ0 661 aaKnown RBP4.48□□□□□ -1.69
RDX-215ENST00000533961 MED15Q96RN5 788 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 MYOCQ99972 504 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 MRI1Q9BV20 369 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 ZNF180Q9UJW8 692 aa4.48□□□□□ -1.69
RDX-215ENST00000533961 ZNF185O15231 689 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 HTRA2O43464 458 aaPredicted RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 SGTAO43765 313 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 CDKL5O76039 1030 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 PCSK1P29120 753 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 SLC16A1P53985 500 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 PIN1Q13526 163 aaPredicted RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 UBXN2BQ14CS0 331 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 DACT2Q5SW24 774 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 AFMIDQ63HM1 303 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 METRNLQ641Q3 311 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 RHOT1Q8IXI2 618 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 CPA6Q8N4T0 437 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 CPEB3Q8NE35 698 aaKnown RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 LINC00476Q8WZB0 136 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 COA7Q96BR5 231 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 ZNF768Q9H5H4 540 aaKnown RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 ANLNQ9NQW6 1124 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 SYBUQ9NX95 663 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 RNF7Q9UBF6 113 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 AJAP1Q9UKB5 411 aaPredicted RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 NEU2Q9Y3R4 380 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 USP15Q9Y4E8 981 aaPredicted RBP4.47□□□□□ -1.69
RDX-215ENST00000533961 IPPQ9Y573 584 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 NOX1Q9Y5S8 564 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 MRFAP1Q9Y605 127 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 ACTL7AQ9Y615 435 aa4.47□□□□□ -1.69
RDX-215ENST00000533961 GPR32O75388 356 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 NDUFA10O95299 355 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 PARNO95453 639 aaKnown RBP4.46□□□□□ -1.7
RDX-215ENST00000533961 AMY1AP04745 511 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 ZFP36P26651 326 aaKnown RBP4.46□□□□□ -1.7
RDX-215ENST00000533961 CHN2P52757 468 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 RAP2BP61225 183 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 TARDBPQ13148 414 aaKnown RBP eCLIP4.46□□□□□ -1.7
RDX-215ENST00000533961 PPP4R3AQ6IN85 833 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 FOXR2Q6PJQ5 311 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 MIGA2Q7L4E1 593 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 MAPKAPK5Q8IW41 473 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 WDR75Q8IWA0 830 aaKnown RBP4.46□□□□□ -1.7
RDX-215ENST00000533961 NUP133Q8WUM0 1156 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 CAVIN3Q969G5 261 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 HSPBAP1Q96EW2 488 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 PHACTR3Q96KR7 559 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 GTPBP4Q9BZE4 634 aaKnown RBP4.46□□□□□ -1.7
RDX-215ENST00000533961 TYW1Q9NV66 732 aaKnown RBP4.46□□□□□ -1.7
RDX-215ENST00000533961 KLHL11Q9NVR0 708 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 RNF181Q9P0P0 153 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 KCNE5Q9UJ90 142 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 SPEF1Q9Y4P9 236 aa4.46□□□□□ -1.7
RDX-215ENST00000533961 ABLIM3O94929 683 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 CT47B1P0C2W7 299 aaPredicted RBP4.45□□□□□ -1.7
RDX-215ENST00000533961 RAP2AP10114 183 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 EGR2P11161 476 aaPredicted RBP4.45□□□□□ -1.7
RDX-215ENST00000533961 RECQLP46063 649 aaPredicted RBP4.45□□□□□ -1.7
RDX-215ENST00000533961 ALDH1A3P47895 512 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 FAM189BP81408 668 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 PPP2R5AQ15172 486 aa4.45□□□□□ -1.7
RDX-215ENST00000533961 GPR162Q16538 588 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms