RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TBC1D32Q96NH3 1257 aa19.73■□□□□ 0.75
UBXN1-216ENST00000533908 CEP72Q9P209 647 aa19.73■□□□□ 0.75
UBXN1-216ENST00000533908 TUBGCP4Q9UGJ1 667 aa19.73■□□□□ 0.75
UBXN1-216ENST00000533908 NUB1Q9Y5A7 615 aa19.73■□□□□ 0.75
UBXN1-216ENST00000533908 INSL5Q9Y5Q6 135 aa19.73■□□□□ 0.75
UBXN1-216ENST00000533908 STK24Q9Y6E0 443 aa19.73■□□□□ 0.75
UBXN1-216ENST00000533908 H7C4K7 107 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 GUCY2CP25092 1073 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 SPAG1Q07617 926 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 TPGS2Q68CL5 300 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 SPIRE2Q8WWL2 714 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 DDX12PQ92771 950 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 NELL1Q92832 810 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 NELL2Q99435 816 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 PLIN2Q99541 437 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 RAB34Q9BZG1 259 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 C17orf75Q9HAS0 396 aa19.72■□□□□ 0.75
UBXN1-216ENST00000533908 CITO14578 2027 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 MED19A0JLT2 244 aaPredicted RBP19.71■□□□□ 0.75
UBXN1-216ENST00000533908 TOM1L1O75674 476 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 VNN2O95498 520 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 GJA1P17302 382 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 PRPHP41219 470 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 ZRSR1Q15695 479 aaKnown RBP19.71■□□□□ 0.75
UBXN1-216ENST00000533908 DTHD1Q6ZMT9 781 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 RNF19BQ6ZMZ0 732 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 ZBTB44Q8NCP5 570 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 ASB16Q96NS5 453 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 SH2B1Q9NRF2 756 aaPredicted RBP19.71■□□□□ 0.75
UBXN1-216ENST00000533908 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 NCANO14594 1321 aa19.71■□□□□ 0.75
UBXN1-216ENST00000533908 NPHP3-ACAD11A0A0J9YXS1 232 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 LAD1O00515 517 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 KINO60870 393 aaKnown RBP19.7■□□□□ 0.74
UBXN1-216ENST00000533908 MICAL2O94851 1124 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 MAPTP10636 758 aaKnown RBP19.7■□□□□ 0.74
UBXN1-216ENST00000533908 PLS3P13797 630 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 MCM4P33991 863 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 ADCY1Q08828 1119 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 TWF1Q12792 350 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 ZBTB6Q15916 424 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 HYIQ5T013 277 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 VITQ6UXI7 678 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 ZNF852Q6ZMS4 543 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 MAP4K3Q8IVH8 894 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 SYT2Q8N9I0 419 aaPredicted RBP19.7■□□□□ 0.74
UBXN1-216ENST00000533908 HINFPQ9BQA5 517 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 ZFP14Q9HCL3 533 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 AFF4Q9UHB7 1163 aaKnown RBP19.7■□□□□ 0.74
UBXN1-216ENST00000533908 TIMM13Q9Y5L4 95 aaPredicted RBP19.7■□□□□ 0.74
UBXN1-216ENST00000533908 CEP250Q9BV73 2442 aa19.7■□□□□ 0.74
UBXN1-216ENST00000533908 ZNF197O14709 1029 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
UBXN1-216ENST00000533908 LILRB5O75023 590 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 CXCL8P10145 99 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 VIPR2P41587 438 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 RPS9P46781 194 aaKnown RBP19.69■□□□□ 0.74
UBXN1-216ENST00000533908 SLC12A3P55017 1021 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
UBXN1-216ENST00000533908 MCL1Q07820 350 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 MTAPQ13126 283 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 ARSHQ5FYA8 562 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 PDZD4Q76G19 769 aaPredicted RBP19.69■□□□□ 0.74
UBXN1-216ENST00000533908 TRMT61BQ9BVS5 477 aaKnown RBP19.69■□□□□ 0.74
UBXN1-216ENST00000533908 CRISPLD1Q9H336 500 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 BRD9Q9H8M2 597 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 PCDHB8Q9UN66 801 aa19.69■□□□□ 0.74
UBXN1-216ENST00000533908 PDCD11Q14690 1871 aaKnown RBP19.69■□□□□ 0.74
UBXN1-216ENST00000533908 TTC26A0AVF1 554 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 OR4Q2P0C623 313 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 MYL4P12829 197 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 TNFSF9P41273 254 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 MAGEA9P43362 315 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 EPHA5P54756 1037 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 STRN3Q13033 797 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 NOLC1Q14978 699 aaKnown RBP eCLIP19.68■□□□□ 0.74
UBXN1-216ENST00000533908 CYP4A22Q5TCH4 519 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 ZNF280DQ6N043 979 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 ZPBP2Q6X784 338 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 APPL2Q8NEU8 664 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 BEST2Q8NFU1 509 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 LRRC15Q8TF66 581 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 DNASE1L2Q92874 299 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 SMARCD2Q92925 531 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 RSPRY1Q96DX4 576 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 ZNF512Q96ME7 567 aaPredicted RBP19.68■□□□□ 0.74
UBXN1-216ENST00000533908 TIPINQ9BVW5 301 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 LRRC3Q9BY71 257 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 ZNF334Q9HCZ1 680 aaPredicted RBP19.68■□□□□ 0.74
UBXN1-216ENST00000533908 ZSCAN32Q9NX65 697 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 DLL3Q9NYJ7 618 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 NDRG2Q9UN36 371 aaKnown RBP19.68■□□□□ 0.74
UBXN1-216ENST00000533908 PCDHGA2Q9Y5H1 932 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 COL4A2P08572 1712 aa19.68■□□□□ 0.74
UBXN1-216ENST00000533908 F5P12259 2224 aa19.67■□□□□ 0.74
UBXN1-216ENST00000533908 M0QZQ0 153 aa19.67■□□□□ 0.74
UBXN1-216ENST00000533908 NCAM2O15394 837 aa19.67■□□□□ 0.74
UBXN1-216ENST00000533908 CLDN3O15551 220 aa19.67■□□□□ 0.74
UBXN1-216ENST00000533908 OAZ2O95190 189 aa19.67■□□□□ 0.74
UBXN1-216ENST00000533908 GDI1P31150 447 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms