RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 HSPA1AP0DMV8 641 aaKnown RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 HSPA1BP0DMV9 641 aaKnown RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 RXRBP28702 533 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ALDH5A1P51649 535 aaPredicted RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 PRELPP51888 382 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 TPD52P55327 224 aaPredicted RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 SLC7A5Q01650 507 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 STX3Q13277 289 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PABPC4Q13310 644 aaKnown RBP eCLIP4.27□□□□□ -1.73
SOX6-217ENST00000533870 TNFAIP1Q13829 316 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 C1orf228Q6PIY5 440 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 NUDCD3Q8IVD9 361 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 ZCCHC9Q8N567 271 aaKnown RBP4.27□□□□□ -1.73
SOX6-217ENST00000533870 DTX3LQ8TDB6 740 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 GPKOWQ92917 476 aaPredicted RBP eCLIP4.27□□□□□ -1.73
SOX6-217ENST00000533870 THAP11Q96EK4 314 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 BLOC1S4Q9NUP1 217 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 PCDHA3Q9Y5H8 950 aa4.27□□□□□ -1.73
SOX6-217ENST00000533870 TRDMT1O14717 391 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 ENTPD3O75355 529 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 APOA1P02647 267 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 CD19P15391 556 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 SERPINB5P36952 375 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 SESN3P58005 492 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 RNASE9P60153 205 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 ZNF543Q08ER8 600 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 CYP1B1Q16678 543 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TMEM132AQ24JP5 1023 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 EFHC2Q5JST6 749 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 ATAD3BQ5T9A4 648 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 PRMT9Q6P2P2 845 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 KCNV1Q6PIU1 500 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TRABD2AQ86V40 505 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 LONP2Q86WA8 852 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 NSUN4Q96CB9 384 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 CCDC126Q96EE4 140 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 NDNQ99608 321 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TRIM62Q9BVG3 475 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 LRRC4BQ9NT99 713 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 BIN2Q9UBW5 565 aaPredicted RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 PNMA3Q9UL41 463 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 PADI4Q9UM07 663 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 ZMYM2Q9UBW7 1377 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 A0A0G2JND7 137 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 WDR64B1ANS9 1081 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TLR3O15455 904 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 ACSL3O95573 720 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 BAG2O95816 211 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 FTLP02792 175 aaPredicted RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 IDO1P14902 403 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TAC1P20366 129 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TKTP29401 623 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 DEFA1P59665 94 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 DEFA3P59666 94 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 BNC1Q01954 994 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 HGSNATQ68CP4 663 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 MIS18BP1Q6P0N0 1132 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TLDC1Q6P9B6 456 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 KYAT3Q6YP21 454 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 RSPH3Q86UC2 560 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 THNSL1Q8IYQ7 743 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 KATNAL2Q8IYT4 538 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 FAM13CQ8NE31 585 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 DEPTORQ8TB45 409 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 SHC3Q92529 594 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 PLIN2Q99541 437 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 COA1Q9GZY4 146 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 GANQ9H2C0 597 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 SPATA31A3Q5VYP0 1347 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TRPC5OSA6NMA1 111 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 ZNF839A8K0R7 811 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 DNAJB5O75953 348 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 VIL1P09327 827 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 FAM58BPP0C7Q3 252 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 ARL4AP40617 200 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 SLCO1A2P46721 670 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 BBS12Q6ZW61 710 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 KIAA0825Q8IV33 1275 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 LRRN4CLQ8ND94 238 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 BEST2Q8NFU1 509 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 APOPT1Q96IL0 206 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 MANSC1Q9H8J5 431 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TMEM8AQ9HCN3 771 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 PKD2L2Q9NZM6 624 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TMEM9Q9P0T7 183 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 FBXO40Q9UH90 709 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 NEU2Q9Y3R4 380 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 ST14Q9Y5Y6 855 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 CLPTM1O96005 669 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 KRT10P13645 584 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 DNAJB1P25685 340 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 PCYT1AP49585 367 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 TMED10P49755 219 aaKnown RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 DMP1Q13316 513 aaPredicted RBP4.26□□□□□ -1.73
SOX6-217ENST00000533870 INSCQ1MX18 579 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 PRR16Q569H4 304 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 MIIPQ5JXC2 388 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 BORAQ6PGQ7 559 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 EGFL6Q8IUX8 553 aa4.26□□□□□ -1.73
SOX6-217ENST00000533870 GOLM1Q8NBJ4 401 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms