RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MCOLN2Q8IZK6 566 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 SERPINB12Q96P63 405 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 ROPN1BQ9BZX4 212 aaPredicted RBP20.54■□□□□ 0.88
CAPN1-226ENST00000533820 ROPN1Q9HAT0 212 aaPredicted RBP20.54■□□□□ 0.88
CAPN1-226ENST00000533820 POC1B-GALNT4F8VUJ3 575 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 TNNI1P19237 187 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 SLC8A1P32418 973 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 IZUMO3Q5VZ72 239 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 GLIS1Q8NBF1 620 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 LMCD1Q9NZU5 365 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 ZNF536O15090 1300 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 COQ9O75208 318 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 NQO1P15559 274 aaKnown RBP20.53■□□□□ 0.88
CAPN1-226ENST00000533820 NSFP46459 744 aaKnown RBP20.53■□□□□ 0.88
CAPN1-226ENST00000533820 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
CAPN1-226ENST00000533820 RHBDF2Q6PJF5 856 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 CEP170P1Q96L14 293 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 SLX4Q8IY92 1834 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 SPDYE2BA6NHP3 402 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 SPDYE6P0CI01 402 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 ETS1P14921 441 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 ACOT2P49753 483 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 ALCAMQ13740 583 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 SLC5A9Q2M3M2 681 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 ANO5Q75V66 913 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 C12orf50Q8NA57 414 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-226ENST00000533820 CCDC134Q9H6E4 229 aa20.53■□□□□ 0.88
CAPN1-226ENST00000533820 RASA4BC9J798 803 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 RASA4O43374 803 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 ATF7P17544 494 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-226ENST00000533820 SLC8A3P57103 927 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 TCEAL1Q15170 157 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 C12orf56Q8IXR9 622 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 VTI1AQ96AJ9 217 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 C1orf112Q9NSG2 853 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 NKIRAS1Q9NYS0 192 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 ADGRA3Q8IWK6 1321 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 TCF4P15884 667 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 PSMC4P43686 418 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 GPC3P51654 580 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 WNT7BP56706 349 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 FAM182AQ5T1J6 154 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 CLEC4DQ8WXI8 215 aa20.52■□□□□ 0.88
CAPN1-226ENST00000533820 NPM3O75607 178 aaKnown RBP20.52■□□□□ 0.87
CAPN1-226ENST00000533820 HSD17B4P51659 736 aa20.52■□□□□ 0.87
CAPN1-226ENST00000533820 CYP24A1Q07973 514 aa20.52■□□□□ 0.87
CAPN1-226ENST00000533820 P3H1Q32P28 736 aa20.52■□□□□ 0.87
CAPN1-226ENST00000533820 BZW1Q7L1Q6 419 aaKnown RBP20.52■□□□□ 0.87
CAPN1-226ENST00000533820 DRAXINQ8NBI3 349 aaPredicted RBP20.52■□□□□ 0.87
CAPN1-226ENST00000533820 ATL2Q8NHH9 583 aa20.52■□□□□ 0.87
CAPN1-226ENST00000533820 SYTL5Q8TDW5 730 aaPredicted RBP20.52■□□□□ 0.87
CAPN1-226ENST00000533820 DDX27Q96GQ7 796 aaKnown RBP20.52■□□□□ 0.87
CAPN1-226ENST00000533820 FEM1BQ9UK73 627 aa20.52■□□□□ 0.87
CAPN1-226ENST00000533820 EXOC7Q9UPT5 735 aa20.52■□□□□ 0.87
CAPN1-226ENST00000533820 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.52■□□□□ 0.87
CAPN1-226ENST00000533820 ICAM1P05362 532 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 GSTA1P08263 222 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 FAM163BP0C2L3 166 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 HARSP12081 509 aaKnown RBP20.51■□□□□ 0.87
CAPN1-226ENST00000533820 FOXN2P32314 431 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 PDCD2Q16342 344 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-226ENST00000533820 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 SEZ6Q53EL9 994 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 FAM160B2Q86V87 743 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 CKAP2Q8WWK9 683 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF516Q92618 1163 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 RBM15Q96T37 977 aaKnown RBP eCLIP20.51■□□□□ 0.87
CAPN1-226ENST00000533820 RMDN3Q96TC7 470 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 TRAIPQ9BWF2 469 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 ANP32DO95626 131 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 NCKAP1LP55160 1127 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 COPS2P61201 443 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 PSMC5P62195 406 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 DNAJC3Q13217 504 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 PTK6Q13882 451 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 SCARA3Q6AZY7 606 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 CGB2Q6NT52 195 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 C4orf33Q8N1A6 199 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 FHDC1Q9C0D6 1143 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-226ENST00000533820 SAYSD1Q9NPB0 183 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 GABBR1Q9UBS5 961 aa20.51■□□□□ 0.87
CAPN1-226ENST00000533820 RBBP6Q7Z6E9 1792 aaKnown RBP20.51■□□□□ 0.87
CAPN1-226ENST00000533820 GOLGA8SH3BPF8 625 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 GOLGA8MH3BSY2 632 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 PYGBP11216 843 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 DSG3P32926 999 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 MGAT5Q09328 741 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 FASTKD3Q14CZ7 662 aaKnown RBP20.5■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF568Q3ZCX4 644 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 TMEM270Q6UE05 265 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 TMEM165Q9HC07 324 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 SLCO1B3Q9NPD5 702 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 ARL2BPQ9Y2Y0 163 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 LAMB3Q13751 1172 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 IWS1Q96ST2 819 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 OSBPL8Q9BZF1 889 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 UBIAD1Q9Y5Z9 338 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 ZNFX1Q9P2E3 1918 aaKnown RBP20.5■□□□□ 0.87
CAPN1-226ENST00000533820 THSD7AQ9UPZ6 1657 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 MYPNQ86TC9 1320 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms