RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 LRRC3BQ96PB8 259 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 TRPV4Q9HBA0 871 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 CEP72Q9P209 647 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 ITPR1Q14643 2758 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 MLLT6P55198 1093 aaPredicted RBP13.58□□□□□ -0.24
SVIP-205ENST00000533774 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.24
SVIP-205ENST00000533774 RING1Q06587 406 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 FOXC1Q12948 553 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 LRRC32Q14392 662 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 TEAD2Q15562 447 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 GLRA4Q5JXX5 417 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 EEF1DP3Q658K8 133 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 TPH2Q8IWU9 490 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 DEPDC1BQ8WUY9 529 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 GAB3Q8WWW8 586 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 LOXL4Q96JB6 756 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 PPP1R10Q96QC0 940 aaKnown RBP13.58□□□□□ -0.24
SVIP-205ENST00000533774 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 POLR3FQ9H1D9 316 aaPredicted RBP13.58□□□□□ -0.24
SVIP-205ENST00000533774 ZSWIM4Q9H7M6 989 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 POLR3BQ9NW08 1133 aaPredicted RBP13.58□□□□□ -0.24
SVIP-205ENST00000533774 INSL5Q9Y5Q6 135 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 CACNA1EQ15878 2313 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 PTPRDP23468 1912 aa13.58□□□□□ -0.24
SVIP-205ENST00000533774 MYBPHLA2RUH7 354 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 SPECC1L-ADORA2AF8WAN1 911 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 PRRG1O14668 218 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 ZNF197O14709 1029 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 B3GAT3O94766 335 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 PRKCBP05771 671 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 ATF2P15336 505 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 CTHP32929 405 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 NOVA1P51513 510 aaKnown RBP13.57□□□□□ -0.24
SVIP-205ENST00000533774 ARPP19P56211 112 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
SVIP-205ENST00000533774 CCINQ13939 588 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 PON2Q15165 354 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 UPP1Q16831 310 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 RNF43Q68DV7 783 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
SVIP-205ENST00000533774 DAGLBQ8NCG7 672 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 SHKBP1Q8TBC3 707 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 ZFYVE19Q96K21 471 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 FZD8Q9H461 694 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 CYP4F11Q9HBI6 524 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
SVIP-205ENST00000533774 LOC400499M0QZD8 3231 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 GON4LQ3T8J9 2241 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 SOBPA7XYQ1 873 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 RPP40O75818 363 aaKnown RBP13.56□□□□□ -0.24
SVIP-205ENST00000533774 MYL4P12829 197 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 ELF1P32519 619 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 MPLP40238 635 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
SVIP-205ENST00000533774 EPHA5P54756 1037 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 FGD1P98174 961 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 ZNF252P-AS1Q0IIN9 211 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 DGKKQ5KSL6 1271 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 STXBP5Q5T5C0 1151 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 CACNA2D4Q7Z3S7 1137 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 CSGALNACT1Q8TDX6 532 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 LRRC3Q9BY71 257 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 LAMA5O15230 3695 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 ADAMTS9Q9P2N4 1935 aa13.56□□□□□ -0.24
SVIP-205ENST00000533774 LRRIQ4A6NIV6 560 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 C4orf47A7E2U8 309 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 CHADO15335 359 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 DGAT1O75907 488 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 RARRES1P49788 294 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 FCHO2Q0JRZ9 810 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 TWF1Q12792 350 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 MRPL58Q14197 206 aaKnown RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 CYP4A22Q5TCH4 519 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 CDCA2Q69YH5 1023 aaPredicted RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 PPP4R3AQ6IN85 833 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 MAEAQ7L5Y9 396 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 BSNDQ8WZ55 320 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 COL26A1Q96A83 441 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 HSD17B14Q9BPX1 270 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 EIF2AK1Q9BQI3 630 aaKnown RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 C8orf33Q9H7E9 229 aaPredicted RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 PRMT7Q9NVM4 692 aaPredicted RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 FBXL5Q9UKA1 691 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 LHX6Q9UPM6 363 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms