RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 SCN5AQ14524 2016 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 H0YGN5 161 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 B4GALT5O43286 388 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 BAIAP3O94812 1187 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ACRP10323 421 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 PON1P27169 355 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 MAGEA10P43363 369 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ACOT2P49753 483 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 YARSP54577 528 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CLDN10P78369 228 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 WDR44Q5JSH3 913 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TWF2Q6IBS0 349 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 NT5DC4Q86YG4 428 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TXLNBQ8N3L3 684 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 FBXL13Q8NEE6 735 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ADAM2Q99965 735 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CRACR2AQ9BSW2 395 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TTYH3Q9C0H2 523 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CDT1Q9H211 546 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 PDZD7Q9H5P4 517 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 APEX2Q9UBZ4 518 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TET1Q8NFU7 2136 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 LTBP2Q14767 1821 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 PDE4DIPQ5VU43 2346 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 LRRIQ3A6PVS8 624 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ADRB2P07550 413 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 SKIP12755 728 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 UCHL3P15374 230 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 GCLMP48507 274 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 FXR1P51114 621 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CDK17Q00537 523 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 BIRC3Q13489 604 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ARID5BQ14865 1188 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ZNF365Q70YC5 407 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 SLC24A5Q71RS6 500 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 C16orf59Q7L2K0 433 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ENOSF1Q7L5Y1 443 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 VWCEQ96DN2 955 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ZBTB45Q96K62 511 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ACAP3Q96P50 834 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TSPAN18Q96SJ8 248 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CGRRF1Q99675 332 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 ASB7Q9H672 318 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 PLEKHA5Q9HAU0 1116 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 LUC7LQ9NQ29 371 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 RGS18Q9NS28 235 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 C1orf112Q9NSG2 853 aa11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 CPSF3Q9UKF6 684 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 BZW2Q9Y6E2 419 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-218ENST00000533761 TNRC18O15417 2968 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 ENPP3O14638 875 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 ZSCAN12O43309 604 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 PHACTR2O75167 634 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 TNNC2P02585 160 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 TMEM191BP0C7N4 346 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 RAB27AP51159 221 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 POLR2FP61218 127 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 KCNMA1Q12791 1236 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 DSC3Q14574 896 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 PTPN21Q16825 1174 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 CBWD6Q4V339 395 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 CBWD3Q5JTY5 395 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 CBWD5Q5RIA9 395 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 KLHDC7AQ5VTJ3 777 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 SFMBT2Q5VUG0 894 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 RRAGAQ7L523 313 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 OTOP2Q7RTS6 562 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 VPS36Q86VN1 386 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 EHBP1Q8NDI1 1231 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 ANKRD36BP1Q96IX9 119 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 NT5C1BQ96P26 610 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 INTS2Q9H0H0 1204 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 PLAGL2Q9UPG8 496 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 USP20Q9Y2K6 914 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 COQ4Q9Y3A0 265 aa11.78□□□□□ -0.52
CCDC90B-218ENST00000533761 A0A0U1RQF3 1178 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 ABLIM1O14639 778 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 XPOTO43592 962 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 CLSTN1O94985 981 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 EDN1P05305 212 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 STAG3L1P0CL83 205 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 GRM5P41594 1212 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 EPHB4P54760 987 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 DLG4P78352 724 aa11.77□□□□□ -0.53
CCDC90B-218ENST00000533761 CCZ1BP86790 482 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms