RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ARHGEF37A1IGU5 675 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 TNFRSF10AO00220 468 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 KIF20AO95235 890 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 RPN1P04843 607 aaKnown RBP17.16■□□□□ 0.34
TSKU-204ENST00000533752 TKTP29401 623 aaKnown RBP17.16■□□□□ 0.34
TSKU-204ENST00000533752 BRCC3P46736 316 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 CBX2Q14781 532 aaPredicted RBP17.16■□□□□ 0.34
TSKU-204ENST00000533752 KNOP1Q1ED39 458 aaKnown RBP17.16■□□□□ 0.34
TSKU-204ENST00000533752 MAN1C1Q9NR34 630 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 MTRRQ9UBK8 725 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
TSKU-204ENST00000533752 BACE2Q9Y5Z0 518 aa17.16■□□□□ 0.34
TSKU-204ENST00000533752 TCF20Q9UGU0 1960 aaKnown RBP17.15■□□□□ 0.34
TSKU-204ENST00000533752 H7C4K7 107 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 HOXD13P35453 343 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 MTHFRP42898 656 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 AARSP49588 968 aaKnown RBP eCLIP17.15■□□□□ 0.34
TSKU-204ENST00000533752 ZP2Q05996 745 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 DPYDQ12882 1025 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 SURF1Q15526 300 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
TSKU-204ENST00000533752 CYP26C1Q6V0L0 522 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 NELFCDQ8IXH7 590 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 CMASQ8NFW8 434 aaPredicted RBP17.15■□□□□ 0.34
TSKU-204ENST00000533752 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
TSKU-204ENST00000533752 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
TSKU-204ENST00000533752 NECAB3Q96P71 396 aaPredicted RBP17.15■□□□□ 0.34
TSKU-204ENST00000533752 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
TSKU-204ENST00000533752 ZNF233A6NK53 670 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 I3L4J1 428 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 TGM5O43548 720 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 RHOBTB3O94955 611 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.33
TSKU-204ENST00000533752 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
TSKU-204ENST00000533752 STK4Q13043 487 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 KCNB1Q14721 858 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 ATAT1Q5SQI0 421 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 VARS2Q5ST30 1063 aaKnown RBP17.14■□□□□ 0.33
TSKU-204ENST00000533752 C9orf57Q5W0N0 161 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 ZNF280DQ6N043 979 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 C15orf39Q6ZRI6 1047 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 FMR1NBQ8N0W7 255 aaPredicted RBP17.14■□□□□ 0.33
TSKU-204ENST00000533752 GJD3Q8N144 294 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 KIAA0895Q8NCT3 520 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
TSKU-204ENST00000533752 OXCT2Q9BYC2 517 aaPredicted RBP17.14■□□□□ 0.33
TSKU-204ENST00000533752 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 DPP3Q9NY33 737 aa17.14■□□□□ 0.33
TSKU-204ENST00000533752 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 ANO9A1A5B4 782 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 GOLGA8IPA6NC78 632 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 GOLGA8JA6NMD2 632 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 M0QZQ0 153 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 TGFB1I1O43294 461 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
TSKU-204ENST00000533752 GUCY2FP51841 1108 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
TSKU-204ENST00000533752 RAB33AQ14088 237 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 LIN9Q5TKA1 542 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 DSTYKQ6XUX3 929 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 RTL10Q7L3V2 364 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 PALB2Q86YC2 1186 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 GLYCTKQ8IVS8 523 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 EFCAB13Q8IY85 973 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 ZNF560Q96MR9 790 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 ZDHHC7Q9NXF8 308 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 FBXW11Q9UKB1 542 aa17.13■□□□□ 0.33
TSKU-204ENST00000533752 ANK1P16157 1881 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 C19orf67A6NJJ6 358 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 PIRO00625 290 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
TSKU-204ENST00000533752 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 ODC1P11926 461 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 PNPLA4P41247 253 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 LILRA4P59901 499 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 YWHAHQ04917 246 aaPredicted RBP17.12■□□□□ 0.33
TSKU-204ENST00000533752 SNRNP35Q16560 246 aaKnown RBP17.12■□□□□ 0.33
TSKU-204ENST00000533752 SLC8B1Q6J4K2 584 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 LILRA6Q6PI73 481 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 GPR149Q86SP6 731 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 USP37Q86T82 979 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 KREMEN2Q8NCW0 462 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 TIGD1Q96MW7 591 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 ITGA11Q9UKX5 1188 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 DSEQ9UL01 958 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 NR2E1Q9Y466 385 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 CDY1Q9Y6F8 540 aa17.12■□□□□ 0.33
TSKU-204ENST00000533752 PDXKO00764 312 aa17.11■□□□□ 0.33
TSKU-204ENST00000533752 KINO60870 393 aaKnown RBP17.11■□□□□ 0.33
TSKU-204ENST00000533752 SMC2O95347 1197 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms