RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 AOPEPQ8N6M6 819 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 C1orf127Q8N9H9 656 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 OR5B17Q8NGF7 314 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 TMEM169Q96HH4 297 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 IGSF21Q96ID5 467 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 ZNF560Q96MR9 790 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 TSPY26PQ9H489 355 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 THEGQ9P2T0 379 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 PRG3Q9Y2Y8 225 aaPredicted RBP23.53■■□□□ 1.36
VPS51-212ENST00000533656 NCOR1O75376 2440 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 PDCD11Q14690 1871 aaKnown RBP23.53■■□□□ 1.36
VPS51-212ENST00000533656 PTPRJQ12913 1337 aa23.53■■□□□ 1.36
VPS51-212ENST00000533656 TDRD15B5MCY1 1934 aaKnown RBP23.53■■□□□ 1.36
VPS51-212ENST00000533656 BECN2A8MW95 431 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 DLG4P78352 724 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 RBP5P82980 135 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 ELAVL2Q12926 359 aaKnown RBP23.52■■□□□ 1.36
VPS51-212ENST00000533656 DCAF17Q5H9S7 520 aaPredicted RBP23.52■■□□□ 1.36
VPS51-212ENST00000533656 TCERG1LQ5VWI1 586 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 C9orf57Q5W0N0 161 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 LMBRD2Q68DH5 695 aaPredicted RBP23.52■■□□□ 1.36
VPS51-212ENST00000533656 TRAPPC11Q7Z392 1133 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 IRF2BP1Q8IU81 584 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 LRRC52Q8N7C0 313 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 FBXO22Q8NEZ5 403 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 FAM200AQ8TCP9 573 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 ARNTL2Q8WYA1 636 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 SLC35C1Q96A29 364 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 POP1Q99575 1024 aaKnown RBP23.52■■□□□ 1.36
VPS51-212ENST00000533656 TMEM8AQ9HCN3 771 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 ADAM28Q9UKQ2 775 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 LZTS1Q9Y250 596 aa23.52■■□□□ 1.36
VPS51-212ENST00000533656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.52■■□□□ 1.36
VPS51-212ENST00000533656 ANK1P16157 1881 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 PIRO00625 290 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 TRAPPC3O43617 180 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 N4BP1O75113 896 aaKnown RBP23.51■■□□□ 1.35
VPS51-212ENST00000533656 TADA2AO75478 443 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 FGF18O76093 207 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 B3GAT3O94766 335 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 C4BPAP04003 597 aaKnown RBP23.51■■□□□ 1.35
VPS51-212ENST00000533656 TRIM49P0CI25 452 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 TRIM49CP0CI26 452 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 TPM4P67936 248 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 NCAPHQ15003 741 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 ZACNQ401N2 412 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 C1orf220Q5T0J3 134 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 CDKAL1Q5VV42 579 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 KRT39Q6A163 491 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 ANKRD20A12PQ8NF67 263 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 PAAF1Q9BRP4 392 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 MARCH5Q9NX47 278 aa23.51■■□□□ 1.35
VPS51-212ENST00000533656 PUF60Q9UHX1 559 aaKnown RBP23.51■■□□□ 1.35
VPS51-212ENST00000533656 SF3B1O75533 1304 aaKnown RBP eCLIP23.51■■□□□ 1.35
VPS51-212ENST00000533656 H3BNC9 293 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 PMM2O15305 246 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 PHACTR2O75167 634 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 KIF4AO95239 1232 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 ITGB3P05106 788 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 PBX3P40426 434 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 MTIF2P46199 727 aaKnown RBP23.5■■□□□ 1.35
VPS51-212ENST00000533656 MXI1P50539 228 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 BIRC3Q13489 604 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 C15orf39Q6ZRI6 1047 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 SV2AQ7L0J3 742 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 DHX40Q8IX18 779 aaKnown RBP23.5■■□□□ 1.35
VPS51-212ENST00000533656 KLHL23Q8NBE8 558 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 ZNF516Q92618 1163 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 SAMSN1Q9NSI8 373 aaKnown RBP23.5■■□□□ 1.35
VPS51-212ENST00000533656 NUB1Q9Y5A7 615 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 MTCH2Q9Y6C9 303 aa23.5■■□□□ 1.35
VPS51-212ENST00000533656 ARHGEF37A1IGU5 675 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 KCNJ18B7U540 433 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 NT5C1B-RDH14C9J2C7 533 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 P4HA2O15460 535 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 STAU1O95793 577 aaKnown RBP23.49■■□□□ 1.35
VPS51-212ENST00000533656 POLR2BP30876 1174 aaKnown RBP23.49■■□□□ 1.35
VPS51-212ENST00000533656 ATICP31939 592 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 TAF6P49848 677 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 GUCY2FP51841 1108 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 PPP3CAQ08209 521 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 MYO1EQ12965 1108 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 TRPC3Q13507 836 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 KCNJ12Q14500 433 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 IQCB1Q15051 598 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 SV2CQ496J9 727 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 TCP11X2Q5H9J9 407 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 TDRD10Q5VZ19 366 aaKnown RBP23.49■■□□□ 1.35
VPS51-212ENST00000533656 DDX53Q86TM3 631 aaKnown RBP23.49■■□□□ 1.35
VPS51-212ENST00000533656 CXorf38Q8TB03 319 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 LMAN2LQ9H0V9 348 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 CBX8Q9HC52 389 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 FANCLQ9NW38 375 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 SIX4Q9UIU6 781 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 MTUS1Q9ULD2 1270 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 AGAP1Q9UPQ3 857 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 BRWD1Q9NSI6 2320 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 NLRC5Q86WI3 1866 aa23.49■■□□□ 1.35
VPS51-212ENST00000533656 AFPP02771 609 aaKnown RBP23.48■■□□□ 1.35
VPS51-212ENST00000533656 TPM2P07951 284 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms