RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 NOSTRINQ8IVI9 506 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 TPH2Q8IWU9 490 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 HS6ST3Q8IZP7 471 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 SYNPOQ8N3V7 929 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 CSGALNACT1Q8TDX6 532 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 RSPRY1Q96DX4 576 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 ZC3H10Q96K80 434 aaKnown RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 EIF2AK1Q9BQI3 630 aaKnown RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 GPR88Q9GZN0 384 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 CYP4F11Q9HBI6 524 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 CEP72Q9P209 647 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 DMXL2Q8TDJ6 3036 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 LRRIQ4A6NIV6 560 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SLC38A8A6NNN8 435 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SOBPA7XYQ1 873 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SPECC1L-ADORA2AF8WAN1 911 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 ACKR2O00590 384 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SYN3O14994 580 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 CCNT1O60563 726 aaKnown RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 RPP40O75818 363 aaKnown RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 AKAP3O75969 853 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 EDN1P05305 212 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 XRCC6P12956 609 aaKnown RBP eCLIP8.59□□□□□ -1.03
NXF1-215ENST00000533440 GJA1P17302 382 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 CTHP32929 405 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 KPNA1P52294 538 aaPredicted RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 TEAD2Q15562 447 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 GLRA4Q5JXX5 417 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 EEF1DP3Q658K8 133 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 RNF43Q68DV7 783 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 IQCEQ6IPM2 695 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 BLOC1S2Q6QNY1 142 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 ZBTB8OSQ8IWT0 167 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SLFN12Q8IYM2 578 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 ELMOD1Q8N336 334 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SHKBP1Q8TBC3 707 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 GATA6Q92908 595 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 ZNF512Q96ME7 567 aaPredicted RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 JAKMIP1Q96N16 626 aaKnown RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 AIFM3Q96NN9 605 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 NAP1L4Q99733 375 aaKnown RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 ADPGKQ9BRR6 497 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 SMOC1Q9H4F8 434 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 GPRC5CQ9NQ84 441 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 VPS45Q9NRW7 570 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 AFF4Q9UHB7 1163 aaKnown RBP8.59□□□□□ -1.03
NXF1-215ENST00000533440 FBXL5Q9UKA1 691 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 MAFFQ9ULX9 164 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 GDAQ9Y2T3 454 aa8.59□□□□□ -1.03
NXF1-215ENST00000533440 DSPP15924 2871 aaKnown RBP8.58□□□□□ -1.04
NXF1-215ENST00000533440 SMIM28A0A1B0GU29 152 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 CCDC194A0A1B0GVG4 234 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 SRRM3A6NNA2 597 aaPredicted RBP8.58□□□□□ -1.04
NXF1-215ENST00000533440 H7C4K7 107 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 GIPC1O14908 333 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 EXTL3O43909 919 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 MARCH6O60337 910 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 USO1O60763 962 aaKnown RBP8.58□□□□□ -1.04
NXF1-215ENST00000533440 PRKCBP05771 671 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 MPLP40238 635 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 NOVA1P51513 510 aaKnown RBP8.58□□□□□ -1.04
NXF1-215ENST00000533440 SOX4Q06945 474 aaPredicted RBP8.58□□□□□ -1.04
NXF1-215ENST00000533440 TWF1Q12792 350 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 PRPF4BQ13523 1007 aaKnown RBP8.58□□□□□ -1.04
NXF1-215ENST00000533440 PON2Q15165 354 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 MAPK6Q16659 721 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 DCAF4L1Q3SXM0 396 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 XKR4Q5GH76 650 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 YAF2Q8IY57 180 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 MCPH1Q8NEM0 835 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 PIGOQ8TEQ8 1089 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 LRRC3BQ96PB8 259 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 LRRC3Q9BY71 257 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 CCDC113Q9H0I3 377 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 C2orf40Q9H1Z8 148 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 ASAH2Q9NR71 780 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 KCNJ14Q9UNX9 436 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 SNX14Q9Y5W7 946 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 AKAP13Q12802 2813 aa8.58□□□□□ -1.04
NXF1-215ENST00000533440 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 TRIP11Q15643 1979 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 BAG4O95429 457 aaKnown RBP8.57□□□□□ -1.04
NXF1-215ENST00000533440 CCDC192P0DO97 292 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 MYL4P12829 197 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 SPINK2P20155 84 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 HSPA4P34932 840 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 PXNP49023 591 aaPredicted RBP8.57□□□□□ -1.04
NXF1-215ENST00000533440 ARPP19P56211 112 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 ZNF252P-AS1Q0IIN9 211 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 FOXC1Q12948 553 aa8.57□□□□□ -1.04
NXF1-215ENST00000533440 PLK5Q496M5 336 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms