RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 TAF6P49848 677 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 CLCNKBP51801 687 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 COPB1P53618 953 aaKnown RBP22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 TDRD10Q5VZ19 366 aaKnown RBP22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 GBP6Q6ZN66 633 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 COLGALT1Q8NBJ5 622 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 TMEM169Q96HH4 297 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 FAM81BQ96LP2 452 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 TGS1Q96RS0 853 aaKnown RBP22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 PBX4Q9BYU1 374 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 VPS16Q9H269 839 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 CXCL16Q9H2A7 254 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 HSD3B7Q9H2F3 369 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 RAB20Q9NX57 234 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 TAB2Q9NYJ8 693 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 PUF60Q9UHX1 559 aaKnown RBP22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 RALGAPA2Q2PPJ7 1873 aa22.74■■□□□ 1.23
PTP4A2-215ENST00000533408 LINC01553A4QN01 128 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 GRXCR1A8MXD5 290 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 SOX4Q06945 474 aaPredicted RBP22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 HPDLQ96IR7 371 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 DNAI2Q9GZS0 605 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 DNAJB4Q9UDY4 337 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 ADAM28Q9UKQ2 775 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 COLQQ9Y215 455 aaPredicted RBP22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 PTPRJQ12913 1337 aa22.73■■□□□ 1.23
PTP4A2-215ENST00000533408 CLSTN1O94985 981 aa22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 CA3P07451 260 aa22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 ATP1A3P13637 1013 aa22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 SLC11A1P49279 550 aa22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 FAM109BQ6ICB4 259 aaPredicted RBP22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 C11orf84Q9BUA3 381 aaPredicted RBP22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 VRTNQ9H8Y1 702 aa22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 GOLGA2P5Q9HBQ8 144 aa22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 PRG3Q9Y2Y8 225 aaPredicted RBP22.72■■□□□ 1.23
PTP4A2-215ENST00000533408 SF3B1O75533 1304 aaKnown RBP eCLIP22.72■■□□□ 1.236e-7■■■■■ 44.4
PTP4A2-215ENST00000533408 LGALS16A8MUM7 142 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 KPNA7A9QM74 516 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 RBAK-RBAKDNI3L0D1 243 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 HLA-DRAP01903 254 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 FAM163BP0C2L3 166 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 UBASH3AP57075 661 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 LILRA4P59901 499 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 FANCCQ00597 558 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 EXOC3L4Q17RC7 722 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 ZNF699Q32M78 642 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 MIIPQ5JXC2 388 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 PPP2R2DQ66LE6 453 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 SMYD5Q6GMV2 418 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 DPH6Q7L8W6 267 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 TTC39CQ8N584 583 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 EHBP1Q8NDI1 1231 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 IGSF21Q96ID5 467 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 RBSNQ9H1K0 784 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 FAM124BQ9H5Z6 455 aaPredicted RBP22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 SIX4Q9UIU6 781 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 DSEQ9UL01 958 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 DAAM1Q9Y4D1 1078 aa22.71■■□□□ 1.23
PTP4A2-215ENST00000533408 PDE4DIPQ5VU43 2346 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 TMEM265A0A087WTH1 108 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 C5orf67F2Z3F1 127 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 CST3P01034 146 aaPredicted RBP22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 DNAJB2P25686 324 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 CTNNB1P35222 781 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 ERVK-21P61565 698 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 TNNC1P63316 161 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 PLCB3Q01970 1234 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 UBXN1Q04323 297 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 UBE3AQ05086 875 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 CBWD6Q4V339 395 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 ZNF667Q5HYK9 610 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 CBWD3Q5JTY5 395 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 CBWD5Q5RIA9 395 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 PDXDC1Q6P996 788 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 DSTYKQ6XUX3 929 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 SLC39A11Q8N1S5 342 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 TAS1R2Q8TE23 839 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 TIFAQ96CG3 184 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 GDAP2Q9NXN4 497 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 LZTS1Q9Y250 596 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 SSX2IPQ9Y2D8 614 aa22.7■■□□□ 1.22
PTP4A2-215ENST00000533408 FNDC1Q4ZHG4 1894 aaPredicted RBP22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 LCHNA4D1U4 455 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 HUS1O60921 280 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 ASS1P00966 412 aaKnown RBP22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 GUCY2FP51841 1108 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 MYL6P60660 151 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 TAP1Q03518 808 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 WDR72Q3MJ13 1102 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 METTL23Q86XA0 190 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 GAS2L3Q86XJ1 694 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 APPL2Q8NEU8 664 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 SPATA18Q8TC71 538 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 NT5C1BQ96P26 610 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 NKX2-4Q9H2Z4 354 aa22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 RTN4Q9NQC3 1192 aaKnown RBP22.69■■□□□ 1.22
PTP4A2-215ENST00000533408 A0A1B0GTH6 734 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 SYN3O14994 580 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 FGF18O76093 207 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 KIF4AO95239 1232 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms