RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 MYL4P12829 197 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 KCNA4P22459 653 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 FCARP24071 287 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 MCM4P33991 863 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 CCT6AP40227 531 aaKnown RBP12.65□□□□□ -0.38
CMTM1-216ENST00000533078 OSTNP61366 133 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 TWF1Q12792 350 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 ST3GAL2Q16842 350 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 PPM1JQ5JR12 505 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 HAUS6Q7Z4H7 955 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 MFSD6LQ8IWD5 586 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
CMTM1-216ENST00000533078 GTF3C6Q969F1 213 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 TCEAL4Q96EI5 215 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 OXCT2Q9BYC2 517 aaPredicted RBP12.65□□□□□ -0.38
CMTM1-216ENST00000533078 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 CXCL16Q9H2A7 254 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 C8orf33Q9H7E9 229 aaPredicted RBP12.65□□□□□ -0.38
CMTM1-216ENST00000533078 AFF4Q9UHB7 1163 aaKnown RBP12.65□□□□□ -0.38
CMTM1-216ENST00000533078 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.65□□□□□ -0.38
CMTM1-216ENST00000533078 TRIP11Q15643 1979 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 ZFHX4Q86UP3 3567 aa12.65□□□□□ -0.38
CMTM1-216ENST00000533078 DPYSL4O14531 572 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 SLC30A4O14863 429 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 KRT37O76014 449 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
CMTM1-216ENST00000533078 ANAPC15P60006 121 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 FZD5Q13467 585 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 VITQ6UXI7 678 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 CEP68Q76N32 757 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 C3orf58Q8NDZ4 430 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 CDT1Q9H211 546 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 BHMT2Q9H2M3 363 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 PARD6AQ9NPB6 346 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 SEMA4GQ9NTN9 838 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
CMTM1-216ENST00000533078 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
CMTM1-216ENST00000533078 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
CMTM1-216ENST00000533078 TICRRQ7Z2Z1 1910 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 CITO14578 2027 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 RALGAPA1Q6GYQ0 2036 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 HEPACAM2A8MVW5 462 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 DTNBO60941 627 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 MCF2P10911 925 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 HARSP12081 509 aaKnown RBP12.63□□□□□ -0.39
CMTM1-216ENST00000533078 FDPSP14324 419 aaKnown RBP12.63□□□□□ -0.39
CMTM1-216ENST00000533078 KCNE1P15382 129 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 TGM1P22735 817 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 CCNE1P24864 410 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 VIPR2P41587 438 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 ALDH1A3P47895 512 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 EPHB3P54753 998 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 PEX3P56589 373 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 SATB1Q01826 763 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 STRN3Q13033 797 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 CSRP2Q16527 193 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 PRR23CQ6ZRP0 262 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 USP37Q86T82 979 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 LONP2Q86WA8 852 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 C12orf50Q8NA57 414 aaPredicted RBP12.63□□□□□ -0.39
CMTM1-216ENST00000533078 SUSD3Q96L08 255 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
CMTM1-216ENST00000533078 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 TRPV4Q9HBA0 871 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 KMT5AQ9NQR1 393 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
CMTM1-216ENST00000533078 KMT2BQ9UMN6 2715 aaPredicted RBP12.63□□□□□ -0.39
CMTM1-216ENST00000533078 CFAP47Q6ZTR5 3102 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 CHADO15335 359 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 SEC24AO95486 1093 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 FGF19O95750 216 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 EDN1P05305 212 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 CHRNB1P11230 501 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 TDGF1P13385 188 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 CCR2P41597 374 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 MATR3P43243 847 aaKnown RBP eCLIP12.62□□□□□ -0.39
CMTM1-216ENST00000533078 YWHAHQ04917 246 aaPredicted RBP12.62□□□□□ -0.39
CMTM1-216ENST00000533078 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
CMTM1-216ENST00000533078 DMWDQ09019 674 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 PTGDRQ13258 359 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 MRPL58Q14197 206 aaKnown RBP12.62□□□□□ -0.39
CMTM1-216ENST00000533078 AASDHQ4L235 1098 aaPredicted RBP12.62□□□□□ -0.39
CMTM1-216ENST00000533078 XKR4Q5GH76 650 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 DGKKQ5KSL6 1271 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 MPZL3Q6UWV2 235 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 CD300LGQ6UXG3 332 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 ALKAL1Q6UXT8 129 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 CEP120Q8N960 986 aa12.62□□□□□ -0.39
CMTM1-216ENST00000533078 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
CMTM1-216ENST00000533078 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms