RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 RTL10Q7L3V2 364 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 SYCP3Q8IZU3 236 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 APPL2Q8NEU8 664 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 BEST2Q8NFU1 509 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 SPATA32Q96LK8 384 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 PRKD2Q9BZL6 878 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 PIDD1Q9HB75 910 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 WDR6Q9NNW5 1121 aaKnown RBP18.08■□□□□ 0.48
PKP3-209ENST00000533069 C2CD2Q9Y426 696 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 CDY1Q9Y6F8 540 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 CLUHO75153 1309 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 POLR2DO15514 142 aaKnown RBP18.07■□□□□ 0.48
PKP3-209ENST00000533069 ADAM12O43184 909 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 POU2F2P09086 479 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 ADSSP30520 456 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 ACOT2P49753 483 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 ASIC1P78348 528 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 ZXDAP98168 799 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 KCNA1Q09470 495 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 TMEM132DQ14C87 1099 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 JADE1Q6IE81 842 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 FEZF2Q8TBJ5 459 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 C7orf25Q9BPX7 421 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 PCDHB8Q9UN66 801 aa18.07■□□□□ 0.48
PKP3-209ENST00000533069 M0QZQ0 153 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 IL18RAPO95256 599 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 LDHAP00338 332 aaKnown RBP18.06■□□□□ 0.48
PKP3-209ENST00000533069 C8AP07357 584 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 COL9A1P20849 921 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 GARTP22102 1010 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
PKP3-209ENST00000533069 MRPL58Q14197 206 aaKnown RBP18.06■□□□□ 0.48
PKP3-209ENST00000533069 UVSSAQ2YD98 709 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 PPM1LQ5SGD2 360 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 ZNF280DQ6N043 979 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 RSPO2Q6UXX9 243 aaPredicted RBP18.06■□□□□ 0.48
PKP3-209ENST00000533069 NT5DC4Q86YG4 428 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 FGFBP2Q9BYJ0 223 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 KCNH3Q9ULD8 1083 aa18.06■□□□□ 0.48
PKP3-209ENST00000533069 KIAA0391O15091 583 aaKnown RBP18.05■□□□□ 0.48
PKP3-209ENST00000533069 EIF3DO15371 548 aaKnown RBP eCLIP18.05■□□□□ 0.48
PKP3-209ENST00000533069 TBC1D4O60343 1298 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 XYLBO75191 536 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 NFICP08651 508 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 ROR1Q01973 937 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 TRIM67Q6ZTA4 783 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 UBALD2Q8IYN6 164 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 ZNF461Q8TAF7 563 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 SLC7A14Q8TBB6 771 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 LEO1Q8WVC0 666 aaPredicted RBP18.05■□□□□ 0.48
PKP3-209ENST00000533069 OXCT2Q9BYC2 517 aaPredicted RBP18.05■□□□□ 0.48
PKP3-209ENST00000533069 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 SORCS3Q9UPU3 1222 aa18.05■□□□□ 0.48
PKP3-209ENST00000533069 PLXNA3P51805 1871 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 GOLGA6L4A6NEF3 574 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 PRPF6O94906 941 aaKnown RBP18.04■□□□□ 0.48
PKP3-209ENST00000533069 SIGLEC14Q08ET2 396 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 CTXN3Q4LDR2 81 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 FAM26FQ5R3K3 315 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 CRELD2Q6UXH1 353 aaPredicted RBP18.04■□□□□ 0.48
PKP3-209ENST00000533069 UNC13DQ70J99 1090 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 CEP57L1Q8IYX8 460 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 FAM213AQ9BRX8 229 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 FBXL5Q9UKA1 691 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 MAFFQ9ULX9 164 aa18.04■□□□□ 0.48
PKP3-209ENST00000533069 UBE4BO95155 1302 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 PVALEFA0A1B0GWK0 134 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 EXTL3O43909 919 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 ABLIM3O94929 683 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 OAZ2O95190 189 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 SLFN14P0C7P3 912 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 CMA1P23946 247 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 GUCY2FP51841 1108 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 YWHAHQ04917 246 aaPredicted RBP18.03■□□□□ 0.48
PKP3-209ENST00000533069 C9orf57Q5W0N0 161 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 TPGS2Q68CL5 300 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 DSTYKQ6XUX3 929 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 USP37Q86T82 979 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 BRSK2Q8IWQ3 736 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 RBAKQ9NYW8 714 aaPredicted RBP18.03■□□□□ 0.48
PKP3-209ENST00000533069 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.03■□□□□ 0.48
PKP3-209ENST00000533069 EPS15L1Q9UBC2 864 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 LIMD1Q9UGP4 676 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 USP25Q9UHP3 1055 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 HCN4Q9Y3Q4 1203 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 CITO14578 2027 aa18.03■□□□□ 0.48
PKP3-209ENST00000533069 ANO9A1A5B4 782 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 WDR27A2RRH5 827 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 TMEM221A6NGB7 291 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 M0R296 226 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 PIRO00625 290 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 ODC1P11926 461 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 ATF2P15336 505 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 TYMPP19971 482 aa18.02■□□□□ 0.48
PKP3-209ENST00000533069 GBP2P32456 591 aaPredicted RBP18.02■□□□□ 0.48
PKP3-209ENST00000533069 ELF1P32519 619 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms