RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 SHISA7A6NL88 538 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 RPL9P32969 192 aaKnown RBP18.75■□□□□ 0.59
CTSB-226ENST00000532656 MCM4P33991 863 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 RPS9P46781 194 aaKnown RBP18.75■□□□□ 0.59
CTSB-226ENST00000532656 ADCY1Q08828 1119 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 RAD51AP2Q09MP3 1159 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 C1orf186Q6ZWK4 172 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 PDZD4Q76G19 769 aaPredicted RBP18.75■□□□□ 0.59
CTSB-226ENST00000532656 HS6ST3Q8IZP7 471 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 TMEM130Q8N3G9 435 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 SUSD3Q96L08 255 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 TBC1D32Q96NH3 1257 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 ASB16Q96NS5 453 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 BRD9Q9H8M2 597 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 ZSCAN32Q9NX65 697 aa18.75■□□□□ 0.59
CTSB-226ENST00000532656 MRPS17Q9Y2R5 130 aaKnown RBP18.75■□□□□ 0.59
CTSB-226ENST00000532656 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
CTSB-226ENST00000532656 PDCD11Q14690 1871 aaKnown RBP18.74■□□□□ 0.59
CTSB-226ENST00000532656 ZNF197O14709 1029 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 TWF1Q12792 350 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 FZD5Q13467 585 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
CTSB-226ENST00000532656 IL17AQ16552 155 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 TPGS2Q68CL5 300 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 ZNF280DQ6N043 979 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 ELMOD1Q8N336 334 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 ZBTB44Q8NCP5 570 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 DNASE1L2Q92874 299 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 ZSWIM3Q96MP5 696 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 MMTAG2Q9BU76 263 aaKnown RBP18.74■□□□□ 0.59
CTSB-226ENST00000532656 TRMT61BQ9BVS5 477 aaKnown RBP18.74■□□□□ 0.59
CTSB-226ENST00000532656 TUBGCP4Q9UGJ1 667 aa18.74■□□□□ 0.59
CTSB-226ENST00000532656 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
CTSB-226ENST00000532656 TICRRQ7Z2Z1 1910 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 CPB1P15086 417 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 GJA1P17302 382 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 U2AF2P26368 475 aaKnown RBP eCLIP18.73■□□□□ 0.59
CTSB-226ENST00000532656 STRN3Q13033 797 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 MTAPQ13126 283 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
CTSB-226ENST00000532656 RSPO4Q2I0M5 234 aaPredicted RBP18.73■□□□□ 0.59
CTSB-226ENST00000532656 SLC10A6Q3KNW5 377 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 CYP4A22Q5TCH4 519 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 IQCEQ6IPM2 695 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 VITQ6UXI7 678 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 RNF19BQ6ZMZ0 732 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 DDX12PQ92771 950 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 ZNF512Q96ME7 567 aaPredicted RBP18.73■□□□□ 0.59
CTSB-226ENST00000532656 C17orf75Q9HAS0 396 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 PRMT8Q9NR22 394 aaPredicted RBP18.73■□□□□ 0.59
CTSB-226ENST00000532656 DLL3Q9NYJ7 618 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 CEP72Q9P209 647 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 AFF4Q9UHB7 1163 aaKnown RBP18.73■□□□□ 0.59
CTSB-226ENST00000532656 COL4A2P08572 1712 aa18.73■□□□□ 0.59
CTSB-226ENST00000532656 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
CTSB-226ENST00000532656 LILRB5O75023 590 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 MOSPD3O75425 235 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 TOM1L1O75674 476 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 MICAL2O94851 1124 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 MYL4P12829 197 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 GDI1P31150 447 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 DTHD1Q6ZMT9 781 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 APPL2Q8NEU8 664 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 NELL1Q92832 810 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 SMARCD2Q92925 531 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 BORCS6Q96GS4 357 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 ZSCAN31Q96LW9 406 aaPredicted RBP18.72■□□□□ 0.59
CTSB-226ENST00000532656 PPP4R2Q9NY27 417 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 PCDHB8Q9UN66 801 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 NCANO14594 1321 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 MYH11P35749 1972 aa18.72■□□□□ 0.59
CTSB-226ENST00000532656 LAD1O00515 517 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 CXCL8P10145 99 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 GUCY2CP25092 1073 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 VIPR2P41587 438 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 MATR3P43243 847 aaKnown RBP eCLIP18.71■□□□□ 0.59
CTSB-226ENST00000532656 SPAG1Q07617 926 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 MAP4K3Q8IVH8 894 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 ZNF687Q8N1G0 1237 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 TMEM161BQ8NDZ6 487 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 IRF7Q92985 503 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 PLIN2Q99541 437 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 NTPCRQ9BSD7 190 aaKnown RBP18.71■□□□□ 0.59
CTSB-226ENST00000532656 TIPINQ9BVW5 301 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 EPC1Q9H2F5 836 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 ZNF334Q9HCZ1 680 aaPredicted RBP18.71■□□□□ 0.59
CTSB-226ENST00000532656 ASAH2Q9NR71 780 aa18.71■□□□□ 0.59
CTSB-226ENST00000532656 SH2B1Q9NRF2 756 aaPredicted RBP18.71■□□□□ 0.59
CTSB-226ENST00000532656 TIMM13Q9Y5L4 95 aaPredicted RBP18.71■□□□□ 0.59
CTSB-226ENST00000532656 F5P12259 2224 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 MAN2B1O00754 1011 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 OR4Q2P0C623 313 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 PLS3P13797 630 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 PSMC3P17980 439 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 MARCKSP29966 332 aaPredicted RBP18.7■□□□□ 0.58
CTSB-226ENST00000532656 PRPHP41219 470 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 TEAD2Q15562 447 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 ZSCAN18Q8TBC5 510 aaPredicted RBP18.7■□□□□ 0.58
CTSB-226ENST00000532656 SPIRE2Q8WWL2 714 aa18.7■□□□□ 0.58
CTSB-226ENST00000532656 FAM3CQ92520 227 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms