RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 FRMD3A2A2Y4 597 aa9.2□□□□□ -0.94
CTNND1-232ENST00000532649 OR1G1P47890 313 aa9.2□□□□□ -0.94
CTNND1-232ENST00000532649 CDK17Q00537 523 aa9.2□□□□□ -0.94
CTNND1-232ENST00000532649 EIF2B5Q13144 721 aaKnown RBP9.2□□□□□ -0.94
CTNND1-232ENST00000532649 CHMP1BQ7LBR1 199 aa9.2□□□□□ -0.94
CTNND1-232ENST00000532649 MAN1C1Q9NR34 630 aa9.2□□□□□ -0.94
CTNND1-232ENST00000532649 MAP10Q9P2G4 905 aa9.2□□□□□ -0.94
CTNND1-232ENST00000532649 ARP10275 920 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 RGS7P49802 495 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 DAB2P98082 770 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 AP1B1Q10567 949 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC85BQ15834 202 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PTF1AQ7RTS3 328 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 C6orf203Q9P0P8 240 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PCDHB8Q9UN66 801 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PODXLO00592 558 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 ACSL3O95573 720 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CLTAP09496 248 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SLC9A1P19634 815 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SYTL3Q4VX76 610 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SDE2Q6IQ49 451 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PKN3Q6P5Z2 889 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TARS2Q9BW92 718 aaKnown RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SAYSD1Q9NPB0 183 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PXMP2Q9NR77 195 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PCDHB7Q9Y5E2 793 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 NCK2O43639 380 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 ASMTLO95671 621 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CYBBP04839 570 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 HOXA10P31260 410 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SREBF1P36956 1147 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 HERVK_113P62684 666 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SEC23AQ15436 765 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 HEATR6Q6AI08 1181 aaKnown RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CDR2LQ86X02 465 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 RHOT1Q8IXI2 618 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 DDX4Q9NQI0 724 aaKnown RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 NDFIP2Q9NV92 336 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 LIMA1Q9UHB6 759 aaKnown RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 ZNF197O14709 1029 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CENPAP49450 140 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 BCAR1P56945 870 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TAP1Q03518 808 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 DEUP1Q05D60 604 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TAS2R42Q7RTR8 314 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 KCTD17Q8N5Z5 321 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 DCUN1D1Q96GG9 259 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 DDX56Q9NY93 547 aaKnown RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TJP2Q9UDY2 1190 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SNX24Q9Y343 169 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 GOLGA8MH3BSY2 632 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 EXTL3O43909 919 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 KRT4P19013 534 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SULT1E1P49888 294 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CDH6P55285 790 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 ST8SIA6P61647 398 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 EDRF1Q3B7T1 1238 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SV2CQ496J9 727 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 SYT2Q8N9I0 419 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC197Q8NCU1 140 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 RFFLQ8WZ73 363 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 C18orf8Q96DM3 657 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 FAM129AQ9BZQ8 928 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TRPV6Q9H1D0 765 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 TTC7AQ9ULT0 858 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-232ENST00000532649 NFU1Q9UMS0 254 aa9.19□□□□□ -0.94
CTNND1-232ENST00000532649 RTN2O75298 545 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 GUCA1CO95843 209 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 ARL4CP56559 192 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC144BQ3MJ40 725 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 RBBP8NLQ8NC74 664 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 SEPT5Q99719 369 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 STK33Q9BYT3 514 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 NDEL1Q9GZM8 345 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 KIAA1683Q9H0B3 1180 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 GAS2O43903 313 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 WBP4O75554 376 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 HLA-DRAP01903 254 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 SERPIND1P05546 499 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 SUPT20HL2P0C7V6 817 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 TAL1P17542 331 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CYP11B2P19099 503 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 MRPL28Q13084 256 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 ZKSCAN8Q15776 578 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 APOBEC3HQ6NTF7 200 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 SLC30A5Q8TAD4 765 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 CPA5Q8WXQ8 436 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 DPF2Q92785 391 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 MRPL40Q9NQ50 206 aaKnown RBP9.18□□□□□ -0.94
CTNND1-232ENST00000532649 FZD1Q9UP38 647 aa9.18□□□□□ -0.94
CTNND1-232ENST00000532649 PRRG1O14668 218 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms