RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CHP1Q99653 195 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 IGFLR1Q9H665 355 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 ABCF3Q9NUQ8 709 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 FARP1Q9Y4F1 1045 aaPredicted RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 COL16A1Q07092 1604 aaPredicted RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 RGS16O15492 202 aaPredicted RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 RTN2O75298 545 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 HTRA3P83110 453 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 ADCY1Q08828 1119 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 ITGB3BPQ13352 177 aaPredicted RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 THOC5Q13769 683 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 MTF1Q14872 753 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 CYP4A22Q5TCH4 519 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 NOP9Q86U38 636 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 KIAA0319LQ8IZA0 1049 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 AKAP3O75969 853 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 NCAM1P13591 858 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 HSD17B4P51659 736 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 CYP24A1Q07973 514 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 PGBD3Q8N328 593 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 TTC25Q96NG3 672 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 EHD2Q9NZN4 543 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 PI4K2BG5E9Z4 385 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 MCF2P10911 925 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 EIF4BP23588 611 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 MRPS6P82932 125 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 COG7P83436 770 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 IQCB1Q15051 598 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 KCNA10Q16322 511 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 RAPH1Q70E73 1250 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 FAF2Q96CS3 445 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 FSD1LQ9BXM9 530 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 PFDN4Q9NQP4 134 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 FOXP2O15409 715 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 CEP85LQ5SZL2 805 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 KLHDC7AQ5VTJ3 777 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 NDUFAF2Q8N183 169 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 RUNDC3BQ96NL0 473 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 BLOC1S4Q9NUP1 217 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 PPME1Q9Y570 386 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 TISP43B9A030 160 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 H3BRJ5 948 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 ASGR1P07306 291 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 CD52P31358 61 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 TPI1P60174 286 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 MAPRE1Q15691 268 aaKnown RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 CCL14Q16627 93 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 FBXO47Q5MNV8 452 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 MIB1Q86YT6 1006 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 A0A087X0B3 334 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 MIF4GDA9UHW6 222 aaKnown RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 NUDT18Q6ZVK8 323 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.63■□□□□ 0.252e-7■■■■■ 62.8
PPFIA1-222ENST00000532504 PGLYRP2Q96PD5 576 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 FXR1P51114 621 aaKnown RBP eCLIP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 UGCGQ16739 394 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 KIAA1755Q5JYT7 1200 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 ZNF280DQ6N043 979 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 C1orf131Q8NDD1 294 aaKnown RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 NKX2-3Q8TAU0 364 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 IFT43Q96FT9 208 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 EPAS1Q99814 870 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 SUDS3Q9H7L9 328 aaPredicted RBP16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
PPFIA1-222ENST00000532504 DEUP1Q05D60 604 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 RHOT1Q8IXI2 618 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 CCDC13Q8IYE1 715 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 CFAP36Q96G28 342 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 RABEP2Q9H5N1 569 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 KCNA3P22001 575 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 PMLP29590 882 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 KDELC2Q7Z4H8 507 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 ZC3H18Q86VM9 953 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 RFFLQ8WZ73 363 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 DDX50Q9BQ39 737 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 CELF4Q9BZC1 486 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 EDEM3Q9BZQ6 932 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 HOMER3Q9NSC5 361 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 FRMPD4Q14CM0 1322 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 GPR25O00155 361 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 P4HA2O15460 535 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 CKMP06732 381 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 HSPA6P17066 643 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 GLRA2P23416 452 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 KLRC2P26717 231 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 C2CD6Q53TS8 623 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 PPP4R1Q8TF05 950 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms