RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 SPATA1Q5VX52 437 aa16.84■□□□□ 0.29
CTSB-225ENST00000532409 SCARA3Q6AZY7 606 aa16.84■□□□□ 0.29
CTSB-225ENST00000532409 EPM2AIP1Q7L775 607 aaPredicted RBP16.84■□□□□ 0.29
CTSB-225ENST00000532409 NOC3LQ8WTT2 800 aaKnown RBP16.84■□□□□ 0.29
CTSB-225ENST00000532409 PAGE5Q96GU1 130 aa16.84■□□□□ 0.29
CTSB-225ENST00000532409 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
CTSB-225ENST00000532409 MAGEF1Q9HAY2 307 aa16.84■□□□□ 0.29
CTSB-225ENST00000532409 HPSEQ9Y251 543 aa16.84■□□□□ 0.29
CTSB-225ENST00000532409 SPTLC1O15269 473 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 CYP3A5P20815 502 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 SCN1AP35498 2009 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 NDUFA8P51970 172 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 ARPP19P56211 112 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 ALCAMQ13740 583 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 RAB33AQ14088 237 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 POSTNQ15063 836 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 ANKS3Q6ZW76 656 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 UNC13DQ70J99 1090 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 NELFCDQ8IXH7 590 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 CMASQ8NFW8 434 aaPredicted RBP16.83■□□□□ 0.28
CTSB-225ENST00000532409 SMG7Q92540 1137 aaKnown RBP16.83■□□□□ 0.28
CTSB-225ENST00000532409 GOLPH3LQ9H4A5 285 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 BACE2Q9Y5Z0 518 aa16.83■□□□□ 0.28
CTSB-225ENST00000532409 MYO10Q9HD67 2058 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 SYN3O14994 580 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 KLRC4O43908 158 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 TBC1D4O60343 1298 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 ZMYND10O75800 440 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 C8AP07357 584 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 ROR1Q01973 937 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 C9orf57Q5W0N0 161 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 C15orf39Q6ZRI6 1047 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 CD302Q8IX05 232 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 BEST2Q8NFU1 509 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 SCFD1Q8WVM8 642 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 SLC39A2Q9NP94 309 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 RAPGEFL1Q9UHV5 662 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 FBXL5Q9UKA1 691 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 PCDHB8Q9UN66 801 aa16.82■□□□□ 0.28
CTSB-225ENST00000532409 TECTAO75443 2155 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 WDR27A2RRH5 827 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 CCL16O15467 120 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 TGFB1I1O43294 461 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 N4BP1O75113 896 aaKnown RBP16.81■□□□□ 0.28
CTSB-225ENST00000532409 ASGR2P07307 311 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 ALADP13716 330 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 GARTP22102 1010 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 AARSP49588 968 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTSB-225ENST00000532409 NTHL1P78549 312 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 MRPL58Q14197 206 aaKnown RBP16.81■□□□□ 0.28
CTSB-225ENST00000532409 CTXN3Q4LDR2 81 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 CCDC149Q6ZUS6 474 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 FSIP1Q8NA03 581 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 SLC7A14Q8TBB6 771 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 HDAC7Q8WUI4 952 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 LRFN3Q9BTN0 628 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 C1QTNF1Q9BXJ1 281 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 PRKD2Q9BZL6 878 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 SCAND2PQ9GZW5 306 aaPredicted RBP16.81■□□□□ 0.28
CTSB-225ENST00000532409 SMOC2Q9H3U7 446 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 ASB7Q9H672 318 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 TMEM206Q9H813 350 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 RBAKQ9NYW8 714 aaPredicted RBP16.81■□□□□ 0.28
CTSB-225ENST00000532409 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 NR2E1Q9Y466 385 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 ATP6V1DQ9Y5K8 247 aa16.81■□□□□ 0.28
CTSB-225ENST00000532409 ANO9A1A5B4 782 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 M0QZQ0 153 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 PIRO00625 290 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTSB-225ENST00000532409 XPOTO43592 962 aaKnown RBP16.8■□□□□ 0.28
CTSB-225ENST00000532409 EXTL3O43909 919 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 C1RP00736 705 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 SYKP43405 635 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 LILRA4P59901 499 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 TFAMQ00059 246 aaKnown RBP16.8■□□□□ 0.28
CTSB-225ENST00000532409 PPM1LQ5SGD2 360 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 LIN9Q5TKA1 542 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 SLC8B1Q6J4K2 584 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 ELMSAN1Q6PJG2 1045 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 CBWD2Q8IUF1 395 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 TDRD5Q8NAT2 981 aaKnown RBP16.8■□□□□ 0.28
CTSB-225ENST00000532409 ZNF507Q8TCN5 953 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 PIDD1Q9HB75 910 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 PDE11AQ9HCR9 933 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 WDR6Q9NNW5 1121 aaKnown RBP16.8■□□□□ 0.28
CTSB-225ENST00000532409 ZDHHC7Q9NXF8 308 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 LIMD1Q9UGP4 676 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 DPP7Q9UHL4 492 aa16.8■□□□□ 0.28
CTSB-225ENST00000532409 DERAQ9Y315 318 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms