RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 NLRP4Q96MN2 994 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 PTPN18Q99952 460 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 IFT122Q9HBG6 1241 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 HOMER3Q9NSC5 361 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHD7-211ENST00000532149 STIM2Q9P246 746 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 MAP2K7O14733 419 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 BUB1BO60566 1050 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 SRGAP2O75044 1071 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 F2P00734 622 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 CYP1A1P04798 512 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 CALB1P05937 261 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 SLC10A3P09131 477 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 PAEPP09466 180 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 UNGP13051 313 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 SMPD1P17405 629 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 CHRNB2P17787 502 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 CTNNA2P26232 953 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 POLR2BP30876 1174 aaKnown RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 CETN2P41208 172 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 SNX16P57768 344 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 PTP4A2Q12974 167 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 CUL1Q13616 776 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 STILQ15468 1287 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 CST9Q5W186 159 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 SLC47A2Q86VL8 602 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 TRIM50Q86XT4 487 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 PHF13Q86YI8 300 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 LRRC71Q8N4P6 559 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 COG1Q8WTW3 980 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 COPS5Q92905 334 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 TATDN2Q93075 761 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 ZBTB45Q96K62 511 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 APBA2Q99767 749 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 THAP2Q9H0W7 228 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 FEZ2Q9UHY8 353 aaPredicted RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 ITGA11Q9UKX5 1188 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
CHD7-211ENST00000532149 PCDHB4Q9Y5E5 795 aa13.13□□□□□ -0.31
CHD7-211ENST00000532149 MBLAC1A4D2B0 266 aaPredicted RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 VNN1O95497 513 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 FTCDO95954 541 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 RHOXF2BP0C7M4 288 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 PNMA6AP0CW24 399 aaPredicted RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 ACO1P21399 889 aaKnown RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 EIF4BP23588 611 aaKnown RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 GNA15P30679 374 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 MAN1A1P33908 653 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 TM4SF4P48230 202 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 ZNF132P52740 706 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 EPHB4P54760 987 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 DRP2Q13474 957 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 NOA1Q8NC60 698 aaKnown RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 ZNF564Q8TBZ8 553 aaPredicted RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 NLRP7Q8WX94 980 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 ACAP3Q96P50 834 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 RHOXF2Q9BQY4 288 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 HAPLN2Q9GZV7 340 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 CDT1Q9H211 546 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 ZHX1Q9UKY1 873 aaPredicted RBP13.12□□□□□ -0.31
CHD7-211ENST00000532149 MTUS1Q9ULD2 1270 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 STRIP2Q9ULQ0 834 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 ALG6Q9Y672 507 aa13.12□□□□□ -0.31
CHD7-211ENST00000532149 MYO1FO00160 1098 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 ZNF185O15231 689 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 THAP12O43422 761 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 CEP104O60308 925 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 MMEP08473 750 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 ABCB4P21439 1286 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 GRM5P41594 1212 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 CLCN3P51790 818 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 NKX3-2P78367 333 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 RBP5P82980 135 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 PAK2Q13177 524 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
CHD7-211ENST00000532149 ZNF699Q32M78 642 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 ZNF667Q5HYK9 610 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 SEL1L2Q5TEA6 688 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 MCOLN2Q8IZK6 566 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 UBR7Q8N806 425 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.11□□□□□ -0.31
CHD7-211ENST00000532149 WHAMMQ8TF30 809 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms